Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1609 ATGGGCCAGTGCTACGGCAAGACAAATCCCACCGTCCAAAATGACGGCGGCGGCGCCGCCAACACAACCACCATAATCTCCGACTCCTCCGCCGCCGGCCAACCGCAGTCACCGCCGCCGTCTTACGCCGCCGGAGCCGGCAACGGGTTCCCGTCGGTGAAGAGCACTCCGGGCAGGTCTTCGAACTCGAGCCCGTGGCCGAGCCCGTACCCGCACGGCGCGAGCCCGGCCCCGGGCGGTTTCGGGGTTTCGCCGTCGCCGGCGAGGACATCGACGCCGAGGAGGTTTTTCCGGCGGCCGTTCCCGCCGCCGTCGCCGGCGAAGCATATTAGGGCATCGCTGGCGAAGCGGCTAGGGCACGGGAAGCCGAAGGAGGGACCGATACCGGAGGACCGGGGGATGGAGCCGGAGCAGGCGGCGTTGGATAAGAGCTTTGGGTATAGTAAGAATTTTGGGGCAAAGTATGAATTAGGGAAGGAAGTGGGTAGAGGGCATTTTGGTCATACTTGTTCTGCAAGGGGGAAGAAGGGTGAGCTTAAAGATCAGCCTGTAGCTGTGAAAATCATCTCAAAGGCAAAGATGACAACAGCAATAGCAATTGAAGATGTTCGAAGAGAAGTGAAAATATTGAAAGCTCTATCTGGCCATAAGCATCTTGTCAAGTATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAGCTTCTTGATAGAATTTTGTCAAGGGGAGGGAGGTATACTGAGGAAGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTCTCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGATCTAAAGCCTGAGAATTTTCTATTCACTTCGCGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGCCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCGCCTGAGGTCCTTCACAGATCCTATAGTCTTGAAGCAGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCCGGAATATTCCGTGCAGTGCTCCGAGCTGATCCAAATTTTGATGATTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTCGTAAAAAGGCTGTTGAACAAAGACTACAGAAAAAGAATGACTGCTGTCCAGGCTCTAACTCACTCTTGGCTGAGAGATGACAACCGCCCTGTACCTCTAGATATATTAGTTTACAAATTAGTGAAGTCTTATCTTATTGCAACACCATTCAAACGAGCAGCACTGAAGGCCCTTTCAAAAGCCTTGTCAGAGGATCAATTGGTGTATCTAAGAGCACAATTCAGATTGTTAGAACCAAGCAAAGACGGCTATGTCTCCCTTGATAACTTCAAAATGGCTCTTGTACGTAATTCAACAGATGCCATGAGGGCATCAAGGGTTCTAGAAATTATACATTCGATGGAACCGCTTGCCTATAGGAAGATGGACTTCGGAGAATTTTGTGCGGCCGCAATTAGCACATACCAATTAGAGGCACTCGATACGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTTGAGAGAGAAGGCAATCGTGTGATATCAGTCGAAGAATTAGCAAGGGAGTTGAATCTTGGTCCTTCGGCTTATTCGATTATCAGAGATTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTGACACTGCGTAGTTCAAACACAAGACACAATTAG 1824 0.4825 MGQCYGKTNPTVQNDGGGAANTTTIISDSSAAGQPQSPPPSYAAGAGNGFPSVKSTPGRSSNSSPWPSPYPHGASPAPGGFGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGMEPEQAALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVSFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHSWLRDDNRPVPLDILVYKLVKSYLIATPFKRAALKALSKALSEDQLVYLRAQFRLLEPSKDGYVSLDNFKMALVRNSTDAMRASRVLEIIHSMEPLAYRKMDFGEFCAAAISTYQLEALDTWEHIASTAFEHFEREGNRVISVEELARELNLGPSAYSIIRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRHN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1609 607 Gene3D Transferase(Phosphotransferase) domain 1 245 435 - -
Mibi11g1609 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Mibi11g1609 607 ProSitePatterns Protein kinases ATP-binding region signature. 161 187 IPR017441 GO:0005524
Mibi11g1609 607 Gene3D - 436 597 - -
Mibi11g1609 607 CDD STKc_CAMK 154 416 - -
Mibi11g1609 607 FunFam CDPK-related kinase 1 453 525 - -
Mibi11g1609 607 SUPERFAMILY Protein kinase-like (PK-like) 154 441 IPR011009 -
Mibi11g1609 607 SUPERFAMILY EF-hand 443 596 IPR011992 -
Mibi11g1609 607 FunFam CDPK-related kinase 1 148 243 - -
Mibi11g1609 607 MobiDBLite consensus disorder prediction 118 134 - -
Mibi11g1609 607 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Mibi11g1609 607 Gene3D Phosphorylase Kinase; domain 1 148 244 - -
Mibi11g1609 607 MobiDBLite consensus disorder prediction 1 134 - -
Mibi11g1609 607 PANTHER SERINE/THREONINE-PROTEIN KINASE 139 582 - -
Mibi11g1609 607 FunFam CDPK-related kinase 3 147 319 - -
Mibi11g1609 607 FunFam Calcium-dependent protein kinase SK5 327 422 - -
Mibi11g1609 607 MobiDBLite consensus disorder prediction 53 68 - -
Mibi11g1609 607 SMART serkin_6 155 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1609 607 MobiDBLite consensus disorder prediction 1 37 - -
Mibi11g1609 607 Pfam Protein kinase domain 155 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1609 607 ProSiteProfiles Protein kinase domain profile. 155 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1609 Mibi-ChrMibi11 36706387 36713211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1609 60 601 EF-hand Containing Proteins AT3G50530 62.158 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi11g1609 Pkinase 3.2e-68 CL0016