Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1607 ATGAAATTGGGCCCCACTAGTTCTCACCATATAAACCCCCCTGGCTCCCTCATATCTCCCCCAACCCAAAAACCCCCTCTCATCTCTCACTCTACACACTCTTCTCCTCATTCACTACTCCATAAACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCATGGATGATCTCATCATCCCTCCTCCTTCTTCTTCCTCTTCCTCTCTCCTGTGTCTCCCCCGAGATAACTCCCAACCTTCCCTCCACCAAAAACTCCAATTCCTCCTCAACAGCCAACCCCATTGGTGGGTCTACGCCATCTTCTGGCAAATCTCCAACGATGACCACCTCCATGGCAACCTCCTCCTCTCCTGGGGCGACGGCCATTTCAATGGCACCAAAGACTCCTCCCCTCGTCTCTCCTCCTCCTCCTCCACCACAACCACCACCACCACCACCACAACCCATTACCCAGAAAGAACCAACTTCATCACCAACATTCACTCCCTCATCAACGACAATACCCAAAACATCTGCAGTGACCTCCATGATACAGAGTGGTTCTATGTCATGTCTCTCACTCGAACCTTCCCTGTCTCTTCCTCCTCTTCTCTCCCTGCTAAAGCCTTCAGTTCCGGTTCTCCCCTCTGGCTCAACAGCGACCACGACCTTCAATTCTGCCACTGTGACAGAGCAAAAGAGGCTTACTTACATGGAATTGAGACTCTGATATGTATACCCACCAACCATGGTGTCATCGAGATGGGTTCCTCTGATCTCATCCCTGAAAACTGGTCCCTCACTCAACAAGCCAAATCTCTCTTCGATTCATCAGAATTCATCTCCAAACAACCCACCAGTAACAACAACAACAACAATCTGATTCAATTCTTCGACGATCAGAACATCTCCTTCGCAGACATCGGCATCATCGCCGGAGTCCAAGAAGAAGACGACGATTCCCCATTGCCGGAAACCAACAACAACGGAAAGAGGATGAAGATGAAGATGAAGAAGAAGGCAAATTCGGGGTTCAAGCTCAGGTACGCAGATTCTGAACATTCTCATTCCGATTCGGACTGTAATAATCCGTCGTCGTTGCCGGTGGAGGAGAAAAGAGTTTCCAAAAAGAGAGGGAGAAAGCCAGGCCTAGGCCGGGAAACACCGATGAACCACGTGGAGGCGGAGAGGCAGCGAAGGGAGAAGCTAAACCACAGATTCTACGCTTTACGCGCTGTGGTCCCCAACGTGTCGAGGATGGACAAGGCTTCCTTGTTGTCAGACGCCGTCGATTACATCAACGAGCTCAAATCCAAGATCGACGATCTAGAATCGCAGATCCAGAAAGAGACAAACAATAACAATAATCACAACAACAAGAGGGTGAAGGCCGAGATGGCGGACACGTGTACTACTGGGGATAACCAGAGTACTACGACCACGTCGACGGAGGAGCAGACGACGACGACATCGGAGGAGGAGGAGGTGGGGATGGAGGTGGAGGTGAGGATGATGGGTGAAGAGGCAATGGTGAGGGTACAATCGGAAAAGAAGGATCATCCAGGGGCGAGGTTGATGGGTGTGTTGAGGGATTTGGAGTTAGGGGTTCATCATGCGAGTATGTCTTGTGTCAATGAGTTCATGCTTCAAGATGTGGTTGTTAAGGTTATCCCAGAAGATCTCAGGAATGAAGATGCCCTCAAGTCTGCTCTTCTCTCACGTTTGGCTCCCCACATAACTAGACGAAAATGA 1734 0.4988 MKLGPTSSHHINPPGSLISPPTQKPPLISHSTHSSPHSLLHKPSSSSSSSSSSAMDDLIIPPPSSSSSSLLCLPRDNSQPSLHQKLQFLLNSQPHWWVYAIFWQISNDDHLHGNLLLSWGDGHFNGTKDSSPRLSSSSSTTTTTTTTTTHYPERTNFITNIHSLINDNTQNICSDLHDTEWFYVMSLTRTFPVSSSSSLPAKAFSSGSPLWLNSDHDLQFCHCDRAKEAYLHGIETLICIPTNHGVIEMGSSDLIPENWSLTQQAKSLFDSSEFISKQPTSNNNNNNLIQFFDDQNISFADIGIIAGVQEEDDDSPLPETNNNGKRMKMKMKKKANSGFKLRYADSEHSHSDSDCNNPSSLPVEEKRVSKKRGRKPGLGRETPMNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVDYINELKSKIDDLESQIQKETNNNNNHNNKRVKAEMADTCTTGDNQSTTTTSTEEQTTTTSEEEEVGMEVEVRMMGEEAMVRVQSEKKDHPGARLMGVLRDLELGVHHASMSCVNEFMLQDVVVKVIPEDLRNEDALKSALLSRLAPHITRRK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1607 577 MobiDBLite consensus disorder prediction 310 393 - -
Mibi11g1607 577 MobiDBLite consensus disorder prediction 338 352 - -
Mibi11g1607 577 MobiDBLite consensus disorder prediction 129 148 - -
Mibi11g1607 577 CDD bHLH_AtAIB_like 379 443 - -
Mibi11g1607 577 MobiDBLite consensus disorder prediction 1 60 - -
Mibi11g1607 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 442 IPR036638 GO:0046983
Mibi11g1607 577 MobiDBLite consensus disorder prediction 463 489 - -
Mibi11g1607 577 SMART finulus 387 436 IPR011598 GO:0046983
Mibi11g1607 577 MobiDBLite consensus disorder prediction 364 393 - -
Mibi11g1607 577 Pfam Helix-loop-helix DNA-binding domain 385 430 IPR011598 GO:0046983
Mibi11g1607 577 MobiDBLite consensus disorder prediction 9 60 - -
Mibi11g1607 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 381 430 IPR011598 GO:0046983
Mibi11g1607 577 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 82 269 IPR025610 -
Mibi11g1607 577 Coils Coil 420 461 - -
Mibi11g1607 577 PANTHER MYC 55 568 IPR045084 GO:0003700|GO:0006355
Mibi11g1607 577 MobiDBLite consensus disorder prediction 463 481 - -
Mibi11g1607 577 Gene3D - 379 448 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1607 Mibi-ChrMibi11 36632479 36634212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1607 79 570 EF-hand Containing Proteins AT5G46830 34.302 1.15e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi11g1607 bHLH-MYC_N 4.8e-48 CL0161