Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi11g1591 | ATGGGGAAGAAGGGAGGAGGAAGTACCTCATGGTTGACTGCTGTGAAAAGGGCATTTAGATCTCCCACCAAAGACACTGACAAAAGAAACCATGAAGATGACGAAGAAAAGAAGAGAGAAAAACGACGATGGATTTTCAGGAAAACACCGAATCAGGAATCTCCGGCTAAGCAGATCCCCGATTCCACTGCCGGAACCGCCGCCCGTGTAAATTTTCCGGCGGCGCCGGTGACGGATCAGAGCAATGCGCTTGTGGCGGCAGTGGCGAAGGCCGAAGCCGCCATGGTTACGGCTCAGGCGGCGGCGGAAGCTGCTAGATTGAAGAGACCTTTCAATGAAGCTAGAGAACATTATGCAGCTACAGTGATTCAAACTGCTTTCAGAGGATACCTTGCTAGGAGGGCACTTCGAGCGCTTAAAGGTTTGGTGAAATTGCAAGCTTTGGTGAGGGGACATAATGTTAGGAAGCAAGCAAAGATGACACTTAGGTGCATGCAGGCTTTGGTTCGAGTTCAAGCCAGAGTTCTTGACCAGCGTTCAAGGTTCTCCCATGAGACTAGTAGTAGAAAATCTACGTTCAGTGATACTAATAGTGTTTGGGAGTCAAGGTATCTTCAGGATATTTCAGATAGGAGATCAATGTCAAGAGAAGGAAGCAGTGTTGCAGACGACTGGGATGAACGCCCACACACAGTTGAGGAACTTAAAGCAATGTTGCGGCAGAGGAAAGAAGCCGCAGCTATGAAGCGTGACAAGTCATTGTCCCAAACTTTCTCCCAACAGCTTTCAAGAAATAGTTGGAACTCATCGTTTGGGAATGAAGATGAACTGGAAGAGATGCCGAAATGCCTGGACCGGTGGATGGCTTCGAAGCCATGGGAGACAAGAGGAAGAGCTTCAACTGATCAGAGAGATGCCATTAAAACTGTGGAAATTGACACTTCTCAGCCTTACTCATATCTGGGATCTAATTACAGAAGATCACATCCTAACTATCAATACAACCCACACCAACCTCAGAGACATTCAGTGGCTTCCCCACTTCACAGAAGCCACCAAAATAATAGTTCTCTTCATCAATCTCCTGCAACCCCATCTCCTGCAAAATCAAGGCCTATCCAAATCCGGTCAGCGAGCCCTCGATGTGGTAGAGAAGATAGAAATTACCATACATCTCAAACCCCAAGTTTGAGGTCCAATTACCAATATGCTGCTGGAAGCATGTACCAAAATGTAAGGGTTGGAACAAGTGTTAGTACTGGGGGTACATTGCCTAATTACATGGCGGCAACTGAGTCTGCGAAGGCCCGGGTTCGGTCTCAAAGCGCGCCGAGGCAGAGGCCTTCGACGCCGGAGAGGGACAGGGCGGGGTCGGTAGCCAAGAAGAGGCTTTCATTCCCTAATGCTCCAGATCCTTATGGTGTTGCAATGGGTTTTGGAAATAATTATGGGCATAACTTAAGAAGTCCAAGCTTTAAAAGTGTGAGTGCTTCACACTTTGGGTTGGAGCAGCAATCCAACTATTCTTCTTGCTACACGGAGAGCCTTGGAGGCGAGATTTCTCCGTCTTCAACGGGCGATCTTAGGAGGTGGTTGAGATGA | 1602 | 0.4806 | MGKKGGGSTSWLTAVKRAFRSPTKDTDKRNHEDDEEKKREKRRWIFRKTPNQESPAKQIPDSTAGTAARVNFPAAPVTDQSNALVAAVAKAEAAMVTAQAAAEAARLKRPFNEAREHYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRSRFSHETSSRKSTFSDTNSVWESRYLQDISDRRSMSREGSSVADDWDERPHTVEELKAMLRQRKEAAAMKRDKSLSQTFSQQLSRNSWNSSFGNEDELEEMPKCLDRWMASKPWETRGRASTDQRDAIKTVEIDTSQPYSYLGSNYRRSHPNYQYNPHQPQRHSVASPLHRSHQNNSSLHQSPATPSPAKSRPIQIRSASPRCGREDRNYHTSQTPSLRSNYQYAAGSMYQNVRVGTSVSTGGTLPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSVAKKRLSFPNAPDPYGVAMGFGNNYGHNLRSPSFKSVSASHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi11g1591 | 533 | SMART | iq_5 | 115 | 137 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | SMART | iq_5 | 138 | 159 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | Gene3D | - | 113 | 169 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 433 | 466 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 511 | 533 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 252 | 273 | - | - | |
| Mibi11g1591 | 533 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 113 | 160 | IPR027417 | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 20 | 48 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 318 | 398 | - | - | |
| Mibi11g1591 | 533 | ProSiteProfiles | IQ motif profile. | 116 | 144 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 318 | 373 | - | - | |
| Mibi11g1591 | 533 | MobiDBLite | consensus disorder prediction | 246 | 274 | - | - | |
| Mibi11g1591 | 533 | Coils | Coil | 88 | 108 | - | - | |
| Mibi11g1591 | 533 | Pfam | IQ calmodulin-binding motif | 143 | 159 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | Pfam | IQ calmodulin-binding motif | 119 | 137 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | ProSiteProfiles | IQ motif profile. | 140 | 167 | IPR000048 | GO:0005515 | |
| Mibi11g1591 | 533 | FunFam | IQ-domain 11 | 115 | 166 | - | - | |
| Mibi11g1591 | 533 | Pfam | Protein of unknown function (DUF4005) | 379 | 482 | IPR025064 | - | |
| Mibi11g1591 | 533 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 468 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi11g1591 | Mibi-ChrMibi11 | 36231671 | 36233777 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi11g1591 | 1 | 533 | IQD Protein Family | AT1G01110 | 58.676 | 2.28e-178 | 511 |