Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1586 ATGGGCTTTATTAGCTATAGGCCCATTAAATTGTTGGCAGCAAACTCTCGTCTCTCTTCCTCGATTGTAACAATGTCGTTCGGAGAGCTTGCTTGCTCTTACGCTATTATGATTCTTCACGATGATGGCATCCCAATCACCAGTGAGAAGATATCAACCGTGGTGAAATCAGCAAATGTTGAAATTGAATCTTATTGGCCAGGCTTATTTGCTAAGCTTGCTGAGAAGAGGGACATTGAGGATCTGATCTTGAATGCCGGCGGTGGTGGGGCCCCGGTTGCCGTTGCCGCCGCTCCGGCTGCTGGAGGCGGTGGTGCTGCCGCCGCCGCACCGGCTGCTGAGGAGAAGAAGGAAGAACCCAAAGAAGAGAGTGATGATGACATGGGCTTCAGCTTGTTTGATTAG 405 0.5037 MGFISYRPIKLLAANSRLSSSIVTMSFGELACSYAIMILHDDGIPITSEKISTVVKSANVEIESYWPGLFAKLAEKRDIEDLILNAGGGGAPVAVAAAPAAGGGGAAAAAPAAEEKKEEPKEESDDDMGFSLFD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1586 134 Hamap 50S ribosomal protein L12 [rpl12]. 30 134 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mibi11g1586 134 MobiDBLite consensus disorder prediction 112 128 - -
Mibi11g1586 134 CDD Ribosomal_P1 29 85 - -
Mibi11g1586 134 MobiDBLite consensus disorder prediction 103 134 - -
Mibi11g1586 134 Pfam 60s Acidic ribosomal protein 46 133 - -
Mibi11g1586 134 Gene3D - 25 87 IPR038716 -
Mibi11g1586 134 FunFam 60S acidic ribosomal protein P1 24 87 - -
Mibi11g1586 134 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 25 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1586 Mibi-ChrMibi11 36079956 36081047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1586 25 134 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 57.522 6.16e-39 125