Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1582 ATGAGTATGCTTTTGGAGAATTTGGGTGAGATGAGGCTGGAGATGGAAGAGGAGATGAACATGTTGAATCAGCAGAAAGATGAGAGCTTTACAGAAATGGTTAAGTGGGAAAAGCTTCTTCCTCAGACGGTGCTCAGAGTTCTTCTTGTGGAAGCTGATGATTCTACTCGCCAGATTATTGCTGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAACTTTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGAAGTGGAGCTGCCATCTATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCATGAAATTTGTAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCTATAAGCATGGCAATGAAATGCATATTAAGAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAACGTACTATCAACCATGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTGCTTCAGAAAACAATGCTGCCAGCAATCATTCAACTGGTTCTGTGGCTTCCACCCAGAAAAATAATGAATGCCTTGATAAAAGGAGTGAGGCCCAAAGCACTTGCACATCGCCTATTTTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATACGTCCCAGCCCTGGAGTTCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAATCTGCAAAACTTGAAAAGGACTCTGCTAAACATAATACTGGAACTACGAAGAGGTCGATTAGTTATTCATCAGAAGCTGCTAAGGGCAACAGCATTATTGACGTGACAAATTTAAGGCTGGAGCAAGACAATTTTGCTGAAACAGAGAATCAGGATGAATCTTTAAGAGCAGAGTTAAATAGAGACAATCCTAATGTTGATACAGAGATTCGTGGCTTCAAGAATGAATTAGTACAACCTTCTAGAGGAGCTATTGACTTTATTTCTACATTTGAGAATACTCCAAAGGATGCTGATGAGAATTATAGTCTTGCTGATGATGGGAGAGACAAGTTTGACCTTGATCCCCAGTTGGAGCTTTCCTTGAGAAATTTTTCTGGCAGCTCATGTAAACAAGAACCTGAGGAAAGGCAAACTTTGAACCGTTCAGTTGCATCTGCCTTTTCTTTGTATAGTAGTAATAAGTTGCCACAGCCCCTTTTTCCAGCATTATCAATGAGTTCTGCCAAATCATATAACACGGAGCTGAATTCCCAGAATTCTAATGGAAAATCAGGAATTGATACTACTAATCAGTATGATGGGACAAATCATACCCGGGAGAATACAAACCCACTGCTTCTTCACCAGTCTGGACAAGTTAGAATGCGATTACCAAATGTTGATCCTGGATCCTCTCCTGCCACTGGTGTTACTTCTGATCACATGTTTAGTAGAAATGGGAATGGTGAGCCTTTATTCTACGCACAATCCGGTGATTATCTCATGTGGGGTCCCAAATCTGCCAGCCAGAAAGAGAATTCTCCCTTTCCTGCGACCACTTCATTCCTGTCAAATGCTGAAAGTCACAACTCAGAACAACACTATCATCGGTCTGATGCCAGATGTGCTTCTTTTGATAAAAAGACTTGGCATGATAAAAGCTACTTGGACCTTACAGTGCACGATTATCCAGGTGCTTATCAGAATACCAGCATGAGTTTATGCCATGACACTCCAAACCTTATTAATGATGCCTTATATGAAAGTATAGGCAGTATAAGAGATGGAGATCATACTTCAGCTGTGGTAATCGAGAAGACCCCCGAAAGCTTTAGTGACAATTATCATGATTACGGCGAATACAGAGGGGCAGATTCTCTGCGTCCCAACCAAAGGGAAGCTGCTCTAACAAAGTTTCGACTGAAGAGGAAAGACAGATGCTTTGAGAAAAAGGTTAGATATCAAAGCCGGAAAAGGCTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCACTTGTTGATTCTGGTGGTGCTGGTGGTGGTTCCTGA 2073 0.4163 MSMLLENLGEMRLEMEEEMNMLNQQKDESFTEMVKWEKLLPQTVLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWETLKKKAPDIDLILTEVELPSISGFALLTLIKEHEICKNIPVIMMSSHDSISMAMKCILRGAADFLIKPVRRNVLSTMWQHVWRRHPKKLEAASENNAASNHSTGSVASTQKNNECLDKRSEAQSTCTSPILEAESAYMQNMQDTSQPWSSSNLSNIDTVKYEESAKLEKDSAKHNTGTTKRSISYSSEAAKGNSIIDVTNLRLEQDNFAETENQDESLRAELNRDNPNVDTEIRGFKNELVQPSRGAIDFISTFENTPKDADENYSLADDGRDKFDLDPQLELSLRNFSGSSCKQEPEERQTLNRSVASAFSLYSSNKLPQPLFPALSMSSAKSYNTELNSQNSNGKSGIDTTNQYDGTNHTRENTNPLLLHQSGQVRMRLPNVDPGSSPATGVTSDHMFSRNGNGEPLFYAQSGDYLMWGPKSASQKENSPFPATTSFLSNAESHNSEQHYHRSDARCASFDKKTWHDKSYLDLTVHDYPGAYQNTSMSLCHDTPNLINDALYESIGSIRDGDHTSAVVIEKTPESFSDNYHDYGEYRGADSLRPNQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPLVDSGGAGGGS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1582 690 MobiDBLite consensus disorder prediction 175 205 - -
Mibi11g1582 690 Coils Coil 5 32 - -
Mibi11g1582 690 SMART REC_2 45 160 IPR001789 GO:0000160
Mibi11g1582 690 Coils Coil 283 303 - -
Mibi11g1582 690 Gene3D - 45 303 - -
Mibi11g1582 690 MobiDBLite consensus disorder prediction 173 205 - -
Mibi11g1582 690 MobiDBLite consensus disorder prediction 419 447 - -
Mibi11g1582 690 ProSiteProfiles Response regulatory domain profile. 46 164 IPR001789 GO:0000160
Mibi11g1582 690 Pfam Response regulator receiver domain 47 158 IPR001789 GO:0000160
Mibi11g1582 690 ProSiteProfiles CCT domain profile. 631 673 IPR010402 GO:0005515
Mibi11g1582 690 PANTHER TWO-COMPONENT RESPONSE REGULATOR 45 298 IPR045279 GO:0009736
Mibi11g1582 690 SUPERFAMILY CheY-like 45 177 IPR011006 -
Mibi11g1582 690 CDD psREC_PRR 47 150 - -
Mibi11g1582 690 Pfam CCT motif 631 673 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1582 Mibi-ChrMibi11 36030182 36034096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1582 630 676 Response Regulator Gene Family AT5G24470 89.362 1.22e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mibi11g1582 Response_reg 1.8e-22 CL0304