Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1580 ATGGAGGCACAAAACTCCAGGGATACACAAGTTATTGAAATTCGTGGACACACCTCTGATGGTGGAAGGACTCATGGGGGAAGTAAGGTTTGTGGGGAAGCACCATGTGGGTTCGCAGATGCTGGATCCATCTCCAGGGATTCCAAAGAACGATTGACATCCATGAGAAAACTGCTGACGGCAGTGATTCTTTGTGTTATATTCATGAGCCTTGAAGTTGTTGGGGGAATCAAAGCTAACAGTCTTGCAATATTGACTGATGCAGCTCACTTGCTTTCGGACGTAGCAGCTTTTGCCATCTCATTATTCTCCTTGTGGGCTGCTGGGTGGGAAGCCACCCCACGTCAATCCTATGGATTTTTCAGGATAGAGATTCTCGGAGCCTTGGTTTCTATCCAGCTAATTTGGTTGCTTACAGGGATTCTTGTCTTTGAAGCCATTCAAAGACTCATTGCTGGTGCTCAAGAGGTTAATGGCCTATTAATGTTTTTGGTTTCTGCATTTGGTCTTTTGGTAAACATTATCATGGCTCTTTTATTGGGTCATGATCATGGGCACGGTCATGGACACGGGCATGGACATGAACACGGACACGATGAACATGATCATGGTCATGACCATGGATCTGTAGTTTCTACCCATCATCATCGTCATCATGATGAAGAACATTCAAGAGAGAAGCCCCATCACCACAGTCATGATGATGTCAGTGAACCACTTCTCAATAAATCAGAAGAAGGCAGATCAGACAAGAAGAAAGATTGGAACATTAATGTGAGAGGGGCTTATCTCCATGTACTTGGGGACTGTATCCAAAGTGTTGGGGTAATGATTGGAGGGGCAATCGTTTGGTACAAACCCGAGTGGAAAGTAGTTGACTTGATTTGCACACTGATATTCTCTGTGATTGTTTTGGCGACGACGATCAGAATGCTGCGAAGCATACTTGAAGTCCTGATGGAGAGCACACCAAGAGAGATTGATGCCACTAAACTCGAACGGGGGCTGCTGGACATGGATGAAGTTGTAGCTGTTCATGAGTTGCATATATGGGCCATTACAGTGGGTAAGGTTTTACTGGCTTGTCATGTGAAAATTAGACCAGAAGCTGATGCAGACTTAATGTTGGACAAGGTTGTAGACTATATCAAAAGGGTCTACAACATAAGTCATGTAACCATTCAGATAGAGCGTTAG 1197 0.4444 MEAQNSRDTQVIEIRGHTSDGGRTHGGSKVCGEAPCGFADAGSISRDSKERLTSMRKLLTAVILCVIFMSLEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLTGILVFEAIQRLIAGAQEVNGLLMFLVSAFGLLVNIIMALLLGHDHGHGHGHGHGHEHGHDEHDHGHDHGSVVSTHHHRHHDEEHSREKPHHHSHDDVSEPLLNKSEEGRSDKKKDWNINVRGAYLHVLGDCIQSVGVMIGGAIVWYKPEWKVVDLICTLIFSVIVLATTIRMLRSILEVLMESTPREIDATKLERGLLDMDEVVAVHELHIWAITVGKVLLACHVKIRPEADADLMLDKVVDYIKRVYNISHVTIQIER 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1580 398 TIGRFAM CDF: cation diffusion facilitator family transporter 55 398 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Mibi11g1580 398 SUPERFAMILY Cation efflux protein transmembrane domain-like 55 321 IPR027469 -
Mibi11g1580 398 MobiDBLite consensus disorder prediction 1 28 - -
Mibi11g1580 398 Gene3D Cation efflux protein transmembrane domain 54 319 IPR027469 -
Mibi11g1580 398 Pfam Cation efflux family 58 320 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Mibi11g1580 398 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 326 397 IPR036837 -
Mibi11g1580 398 MobiDBLite consensus disorder prediction 187 251 - -
Mibi11g1580 398 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 9 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1580 Mibi-ChrMibi11 36006377 36007573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1580 1 398 Inorganic Solute Cotransporters AT2G46800 68.922 0.0 511