Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1577 ATGGCTCATTTCTTGAAGTCCAAAGCCATCCTCACCAATGGAGAATTAAACGACCTCAATCAACCACATGAAAATCACATACAAGAGGAAGAAGAAAGCTATATGTACGCCATGCAACTAGCAGGCTCCTCTGTTCTCTCCATGTCTCTTCAAGCCGCCTTCGAGCTCGGAGTCTTCGACGCCATCGCCGGAGCCGGCGACGCCGCACATCTATCCGCAAAAGACATAGCCACCATAACATCCTGCAGCAACCCAGAAGCTCCAACAATGTTGGATCGTCTCCTTAGTCTCCTAGCCAGCCACTCTATTCTTCATTGCTCTGTAATTCACAACGAACAAGGAACAAAACAGAGGACTTACAGTCTCTCCCCTGTTTCAAAACACTTCGTTTCAGATTCTAATGGCGCCTCTTTGGGAAATATCTTGACCCTGATACAAGACAAAGTCTTCCTAGAGAGCTGGAGGGAGTTAAAGGGAGCGATAAAGGAAGGAGGGATTGCATTTAATAGAGTGTATGGGATGCATGCGTTTGAGTATCCAAGTAAGGATGCGAGGTTTAATGATGCTTTCAACAAGGCGATGTATGATGGGACCATTCTGACAATGAGCAAGATTCTTCAATTCTATGATGGATTTGAGGGGCTGGACACAGTCGTGGATGTTGGAGGTGGTCTTGGGATTAACCTTAATTTGGTCACTTCCAAGTATTCTCATATACATGGCATCAATTTTGATCTTCCTCATGTCATCCAAACTGCCCCGACATATCCTCGTGTGCAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTCAAGGAAATGCCATTTTTATGAAGTGGATATTGCATGATTGGAGCGATGAACATTGTGTGAAGCTGTTGAAGAATTGCTACAAGGCAATTCCAGAAGATGGAAAAGTCATTATAGTGGACAAAATTCTACCAGATGAACTAAACACTAGTGTTTCTCTCCAAGCTGCTCTTCAAGGAGATGTCCTCATGATGACCCAAAATCCAGGAGGCAAAGAACGGACCCATAAGCAATTTTTGGAATTGGCTTCTCATTCCGGGTTTGCGGGGATCCGATTCGTTTGTCAGGTTTGCGGGTTATGGGTTATGGAGTTCTACAAGTAA 1134 0.4462 MAHFLKSKAILTNGELNDLNQPHENHIQEEEESYMYAMQLAGSSVLSMSLQAAFELGVFDAIAGAGDAAHLSAKDIATITSCSNPEAPTMLDRLLSLLASHSILHCSVIHNEQGTKQRTYSLSPVSKHFVSDSNGASLGNILTLIQDKVFLESWRELKGAIKEGGIAFNRVYGMHAFEYPSKDARFNDAFNKAMYDGTILTMSKILQFYDGFEGLDTVVDVGGGLGINLNLVTSKYSHIHGINFDLPHVIQTAPTYPRVQHVGGDMFESVPQGNAIFMKWILHDWSDEHCVKLLKNCYKAIPEDGKVIIVDKILPDELNTSVSLQAALQGDVLMMTQNPGGKERTHKQFLELASHSGFAGIRFVCQVCGLWVMEFYK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1577 377 PANTHER O-METHYLTRANSFERASE 37 375 IPR016461 GO:0008168
Mibi11g1577 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 376 IPR029063 -
Mibi11g1577 377 FunFam Caffeic acid O-methyltransferase 130 377 - -
Mibi11g1577 377 Gene3D - 17 129 IPR036388 -
Mibi11g1577 377 Pfam O-methyltransferase domain 154 358 IPR001077 GO:0008171
Mibi11g1577 377 CDD AdoMet_MTases 217 310 - -
Mibi11g1577 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 377 IPR016461 GO:0008168
Mibi11g1577 377 FunFam Caffeic acid 3-O-methyltransferase 17 129 - -
Mibi11g1577 377 PIRSF O-mtase 16 377 IPR016461 GO:0008168
Mibi11g1577 377 SUPERFAMILY "Winged helix" DNA-binding domain 29 132 IPR036390 -
Mibi11g1577 377 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Mibi11g1577 377 Gene3D Vaccinia Virus protein VP39 130 377 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1577 Mibi-ChrMibi11 35980770 35983477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1577 30 377 Monolignol Biosynthesis Gene Families AT5G54160 51.149 3.54e-132 381