Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1574 ATGTTAGCTCCTGTTCTTTTTGGAGTAGTACTACTCCTTGCTTTGTGCTTGCCTTTTTCTTGTGGTTCCTTTCAGGACCAAGAAAAGGTACTAGAATCATCATCCATTAATTTGCTTCCCAATTCCTGCAACGAAACATGTGGGAAACACAATGTTCCTTTTCCATTCTATGTGAACTCGTCTTGCGTTTCAATATCTCATGCTTTCAATCTCTCTTGCTCAAATTCCTCTTCCCTTCTTCTCAGAATTGGCTCAGAAAACTATCCTGTGATTGAATTCTTCCCTGATGGTGTCCTAGTAGACTTTCCAGGCACATTATCGTGTCGTCAGTACAATGATCTCAACTCTTTTGGTAAAAGTTTTGTGAGAAATGAACACTTTGGAGTCTCAGTGGATAATGTTATTGGTCTCTATGACTGTGAGGATTCTTCTCTGTGCAAAGCAGACTGTGAAACAGTTGACTTGCCTGGTTGTGATGGAGATGGTGATGGTGGAGGTGGCTCACTTGGTTGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTTTCTGAGTATGGATGCAGGGGATTTTCTAGTTGGGCTGTTCGTAGAGGGTCAAATTCAGGAAAGAGAGGGGTAAAATTGGAATGGGCTATTCCTAATAAGAACTCACCTAAGGAAGTTTGCTCAAGCAACGCAGAATTGGTGAATGCTACATCAGTTGAAGGTGGAGCAAGGTGTATGTGTGAGGATGGGTATGTTGGTGATGGATTTGCAAATGGAACTGGATGCTTGCAAGCCTGTGTCAAGGATGGACAAGAAGCATATGGCAGTGACTGCTACATCACTAGAAAAGATCAAAGAAAATTTGTCATCATCGCTGGAATCCTTGGTCCAGTTCTTATTGTTGCCTCCTTGCTAGCACTATTTTGCCTTCTTAAAAGACCACAAAAACCAGGAACTTTTGACAATGACCAGGCTTACTATCACACCACCTCCTTTCAAAAGGCTTGTAGAACTCAATTGTTCAGCCTCCTCGAGCTAGAGGAGGCGACGAAAGGTTTCGCTGAGGATCAGAAACTCACACACAGTAGTAACAATGGTACAATTTTCGCTGGAGTTCTTGGGGATGGATCACATGCAGCTGTCCACAAGTTGCAATATGATACTGAGAAAGACCTTATTCAAGTCCTTGCACAAATTGAGGTTCTATCTGCCATTTCACACAAGAATTTGTCCCGCCTTCTTGGATGCTGTATAGATGCTGGCTATCCTTCTTTGGTTGTCTATGAGTATCCTGCAAATGGTACCTTAGAGGACCATTTACATCAAAGAAAGGGCCATAAACTTTGTTTGGACTGGAACAAAAGAGTGATCATTGCTGCAGAAACAGCCAATGTTCTTGCATTCTTACAATATGACACTTCTCCCCCTATATTCCATCACAATCTTAAATCTGGCTGCATCTTCCTAGATGATGATTTCTCTGTCAAGATTGCAGGATTCAGGCTAGTCAATATGAAATTTAACTATCGCTATGATAACAACATTGAAGGCTTGAATTTCTGCAAGAATGATGTTTCTGACATGGGTGTATTGCTTCTTGAGATCATTTCAGGCTCAAAACATCATCACTTGAACACACCAACTCAAGCACTTCAAAAGATTAGGACAGGGAAGCTCGAAGAAATCGTCGATCCCTTGCTCTACTACCATGAGCAAACTCGTTCTTGCCAAGAACAGATACAGATAATAGCAGACCTTGCAACAAGATGTATGTTGTTTGGTACAGATGGAAAGATGGGGATGATTGATGTTGCAAGAGAGTTGACACACATAACAAAAGAGAGTGTTGATGGAGGAATCACAAGAGGAGGACTTTCTTTGGAAGAGACATTCTCAAATTCTAGCCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGCATGTACCTTAA 1962 0.4154 MLAPVLFGVVLLLALCLPFSCGSFQDQEKVLESSSINLLPNSCNETCGKHNVPFPFYVNSSCVSISHAFNLSCSNSSSLLLRIGSENYPVIEFFPDGVLVDFPGTLSCRQYNDLNSFGKSFVRNEHFGVSVDNVIGLYDCEDSSLCKADCETVDLPGCDGDGDGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFSSWAVRRGSNSGKRGVKLEWAIPNKNSPKEVCSSNAELVNATSVEGGARCMCEDGYVGDGFANGTGCLQACVKDGQEAYGSDCYITRKDQRKFVIIAGILGPVLIVASLLALFCLLKRPQKPGTFDNDQAYYHTTSFQKACRTQLFSLLELEEATKGFAEDQKLTHSSNNGTIFAGVLGDGSHAAVHKLQYDTEKDLIQVLAQIEVLSAISHKNLSRLLGCCIDAGYPSLVVYEYPANGTLEDHLHQRKGHKLCLDWNKRVIIAAETANVLAFLQYDTSPPIFHHNLKSGCIFLDDDFSVKIAGFRLVNMKFNYRYDNNIEGLNFCKNDVSDMGVLLLEIISGSKHHHLNTPTQALQKIRTGKLEEIVDPLLYYHEQTRSCQEQIQIIADLATRCMLFGTDGKMGMIDVARELTHITKESVDGGITRGGLSLEETFSNSSLLQMISMSPDSMHVP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1574 653 Pfam Wall-associated receptor kinase galacturonan-binding 43 92 IPR025287 GO:0030247
Mibi11g1574 653 Gene3D Phosphorylase Kinase; domain 1 329 433 - -
Mibi11g1574 653 ProSiteProfiles Protein kinase domain profile. 357 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1574 653 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 34 615 IPR045274 GO:0007166
Mibi11g1574 653 Pfam Protein tyrosine and serine/threonine kinase 368 511 IPR001245 GO:0004672|GO:0006468
Mibi11g1574 653 Gene3D Transferase(Phosphotransferase) domain 1 435 623 - -
Mibi11g1574 653 SUPERFAMILY Protein kinase-like (PK-like) 339 611 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1574 Mibi-ChrMibi11 35950883 35953752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1574 43 614 Receptor kinase-like Gene Family AT2G23450 28.852 2.40e-53 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Mibi11g1574 PK_Tyr_Ser-Thr 1.9e-14 CL0016