Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1570 ATGGAATTGCTTATGCAAGATGTCAAAATGCACTCTGATGATAAACAAGAAGACGAAGAAGAAGAAGATGAAGAAGAAGACGAAGCAGAGATAGCTAGACGAAGAGAAGAAATCAGCAGCAACAGCAGTAAGAATAACAATTACCTTCATTTCTCATCTCCAAATTACGAACCTACTAGTCTTCTTCATCTTCATCATCATCATCAACAACATCAAAATTCATGGTTAGGCCTTCACCACGACCACCACCACCATCACTCTCCAGAAGAAGCTTCCACCACCATCGAATCTCACAATTCATCCCCTGGTTTAGGGTTTCAATCTCCACCACCGACCTCCAATTTCACCTCCAACCACTCCAAACTCGACCTCTCCCTCGGCCAATTCGCCACCGCAAACCACCACGAAGAACAAGACGCCGCCAATTTCAACGGCGGCGGAGAGAACGACGCTGTTCCTGCTTCAATTGAGAAAGAGCACATGTTCGATAAAGTCGTTACGCCTAGTGACGTAGGCAAGCTTAACCGTCTCGTCATACCAAAGCAACACGCAGAAAAGTACTTCCCTCTCGATTCTTCCTCCAACGACAAAGGATTGCTCTTGAATTTCGAGGATCGCAACGGTAAGCTATGGCGATTCCGTTACTCTTACTGGAATAGCAGCCAGAGCTATGTCATGACCAAAGGTTGGAGCCGTTTTGTTAAAGAGAAGAAGCTCGACGCCGGCGACATCGTCTCCTTCCACCGCGGCGCCGCCGACTCCCACCGCCACCGCCTCTACATCGATTGGCGCCGCCGCCCCGATCACGCCGCCGCCGATCCGGGCTTTTTCGCGCCTTTCCTACTTCATCAGCCGGCGGCGGCGGCGGCGGCCATCCGGTGGGGAGGCCGGCTGTTCTCGGTCCCGCCGTCGCGGCCGGTGAACCATGGTAACATGGTTCACTTGCATCATAGTAATCCGTGGCAGTACAGCCAAGTACATCATCATGGAAATCTGCAGCAAGAACATTACTATAATGTGGTGGACTCGAGATCTGTATCGTCAGGCTCGGTGTATTCGAACCTGATAGGGCAACAACAAGGGGTGAGAAATGTTCCGATGATTATAGATTCTGTTCCTGTTGATCATTGTCGTCATAATTCTCATTATCATGATCAAAGATATTACCATGGTAAAAATGCTGGTGGTAGTGGTGGTGATGGTGGTAATACTGCTGCTAATAATGTTGGTAAGAGGCTTAGGCTGTTTGGGGTGAACATGGAATGTGCTTCATCTTCATCGTCTTCTTCAGTGGAAGAATCAAGATGTTGTAATAATAATGTGACAGTAATGGGAAATAATGCATCAATTTCATCTTCTGTTATTCCACCACCAACATCTCTTCATCATCATCAGTATTTGAGGGTACTACCCAATCATGAGGATCATCCAATTTCTTCATCGTCATTATCGTCAGGAAGATTTCATCATCAGAGAGGGGAAACTTCGATGCTTTTTGATTTGGATCCCTCTTTGCATTACAGCAGCAGCAGCAGGAGGCAGTGA 1545 0.4757 MELLMQDVKMHSDDKQEDEEEEDEEEDEAEIARRREEISSNSSKNNNYLHFSSPNYEPTSLLHLHHHHQQHQNSWLGLHHDHHHHHSPEEASTTIESHNSSPGLGFQSPPPTSNFTSNHSKLDLSLGQFATANHHEEQDAANFNGGGENDAVPASIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGAADSHRHRLYIDWRRRPDHAAADPGFFAPFLLHQPAAAAAAIRWGGRLFSVPPSRPVNHGNMVHLHHSNPWQYSQVHHHGNLQQEHYYNVVDSRSVSSGSVYSNLIGQQQGVRNVPMIIDSVPVDHCRHNSHYHDQRYYHGKNAGGSGGDGGNTAANNVGKRLRLFGVNMECASSSSSSSVEESRCCNNNVTVMGNNASISSSVIPPPTSLHHHQYLRVLPNHEDHPISSSSLSSGRFHHQRGETSMLFDLDPSLHYSSSSRRQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1570 514 ProSiteProfiles B3 DNA-binding domain profile. 162 267 IPR003340 GO:0003677
Mibi11g1570 514 SUPERFAMILY DNA-binding pseudobarrel domain 159 267 IPR015300 -
Mibi11g1570 514 MobiDBLite consensus disorder prediction 16 30 - -
Mibi11g1570 514 FunFam B3 domain-containing protein 155 274 - -
Mibi11g1570 514 Coils Coil 1 37 - -
Mibi11g1570 514 MobiDBLite consensus disorder prediction 93 120 - -
Mibi11g1570 514 Pfam B3 DNA binding domain 162 266 IPR003340 GO:0003677
Mibi11g1570 514 MobiDBLite consensus disorder prediction 1 52 - -
Mibi11g1570 514 MobiDBLite consensus disorder prediction 1 15 - -
Mibi11g1570 514 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 16 431 IPR044800 GO:0003700
Mibi11g1570 514 MobiDBLite consensus disorder prediction 79 120 - -
Mibi11g1570 514 SMART B3_2 162 267 IPR003340 GO:0003677
Mibi11g1570 514 CDD B3_DNA 160 255 IPR003340 GO:0003677
Mibi11g1570 514 Gene3D - 155 273 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1570 Mibi-ChrMibi11 35893340 35894884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1570 122 423 B3 DNA Binding Superfamily AT1G01030 46.226 2.66e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi11g1570 B3 4e-28 CL0405