Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1562 ATGCAAATATATCTTGCAATCACCGAATCTTTCAAGACTGGTAGTCACCCACCAGCCAAAATTTTTACCAACCCATTTAGATATATGGAACTGACACTTCTGTCTATTTCTCTATATGATCTCTCATCTCACTTCCATTACTTTGCCCACTGGTTGAAGAGGGACCTGAAGCTCCTGACTTCACCTGCGCTCGTCGTGGTCCCTTTGGTACTATTATTATCACTCTTCCTCAAATGTGGGACAAGCTGCTATAACATGGCTGAGGAATTGGATAAACCATTGCTTGAACCTGAGAGTTTCAGTCGTGAGGGTATTGATTTGGTACGTATACCGTTAGAAGAAGTGTTTGAACATTTAAGAACATCGCGAAGAGGACTTTCAACTGAAGATGCTGAGGCTAGGCTGTTAATATTTGGCCCCAACAAACTTGAAGAGAAGAAAGAGAATAAAATACTGAAATTTTTTAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCGGCAGCAATTATGGCAATTGTTCTTGCAAATGGGGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTATGTGCCTGTTAGTAATAAACTCAACAATCAGTTTTATAGAAGAAAATAATGCTGGGAATGCCGCAGCAGCACTGATGGCTCATTTAGCTCCTAAAACAAAGGTTCTTAGAGATGGGCGCTGGCAAGAGCAAGATGCCTCTATTTTAGTACCTGGAGATGTAATCAGCATAAAGCTGGGAGATATCATCCCAGCTGATGCTCGCCTTCTTGAAGGAGACCCTCTAAAAATTGACCAGTCATCTCTCACTGGGGAATCCCTTCCTGTCACCAAGAAGACAGGTGATGAAGTCTTTTCTGGCTCAACTTGTAAGCATGGTGAGATAGAAGCTGTAGTGATTGCTACTGGTGTTCAGACATTTTTCGGAAAGGCAGCGCACTTGGTTGACAGTACTGAAGTTGTTGGGCATTTTCAGAAGGTCCTAACAGCAATTGGGAACTTCTGCATATGCTCTATAGCTGTAGGAATGGTACTTGAAATCATTGTGATGTTCCCAATACAGCATCGCTCATATAGGGATGGAATCAACAACCTACTTGTTCTCTTGATTGGAGGAATACCCATAGCCATGCCAACAGTCTTATCTGTTACACTTGCAATTGGCTCTCATAGACTTTCACAACAGGGAGCCATCACAAAAAGGATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTCACCCTGAATCGCCTCAGTGTTGATAGAAGCCTTATTGAGGTCTTCAACAGAAATATGGACAGAGATAAGGTTGTTCTTCTAGCTGCCAGAGCAGCTAGACTGGATAACCAGGATGCCATTGATAGTGCTATTGTTAATATGCTGTCTGATCCAAAGGAGGCACGTGCAAACATAACTGAAGTTCATTTTCTACCTTTCAACCCAGTTGATAAGCGTACTGCAGTTACTTATATTGATTCTGAAGGCAATTGGTATAGAGCCAGCAAAGGAGCTCCTGAACAGATTCTAAGTATTTGCCAAGAGAAAGACGAGATTGCTGGAAAAGTGCATGCAATCATTGACAAGTTTGCTGAAAGGGGCTTGCGATCTCTTGCTGTTGCTTATCAGGAAGTTCCTGAAAAATCTAAGGATAGTCCTGGAGGTCCTTGGACTTTCTGTGGGTTGTTGCCCTTGTTTGATCCTCCAAGACAAGATAGTGCTGAGACCATTCGTAGAGCACTTAATCTTGGAGTCTGTGTCAAGATGATTACAGGGGATCAGTTGGCAATTGCAAAAGAAACAGGCAGAAGACTAGGTATGGGGACCAACATGTACCCTTCTTCATCATTGTTGGGTCGTGACAAAGATGAATATGAAGCTCTCCCAGTTGATGAGCTGATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAAATCTTGCAAGAAAAGAAGCATATAGTTGGAATGACTGGAGATGGTGTGAATGATGCGCCGGCTTTAAAGAAAGCAGATATTGGAATTGCTGTGTCAGATGCTACAGATGCTGCAAGAAGTGCTGCTGATCTAGTCTTAACTGAACCGGGCTTAAGTGTGATTATCAGTGCTGTGTTAACTAGCAGATCTATATTTCAAAGAATGAAGAACTACACAATATATGCAGTTTCCATAACCATAAGGATAGTGCTTGGTTTTGTGCTCCTGGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATAGCAATACTGAATGACGGAACTATCATGACCATATCCAAAGATAGGGTAAAACCATCTCCAACACCAGACAGTTGGAAGTTGCCTGAGATCTTTGCAACGGGAATTGTCATTGGCACTTACCTTGCTTTGATCACTGTCCTTTTCTACTGGGTCATAGTGAAGACCACTTTCTTTGAGACACACTTTCATGTAGCATCCATATCCAGCGACAGTGAGAAAGTTTCATCTGCTGTGTATCTTCAAGTTAGCATCATTAGTCAAGCTTTAATCTTTGTTACCCGTAGTCGAGGCTGGTCTTTTATGGAAAGACCTGGAGTTCTGTTGATGTGTGCCTTTGTAATTGCTCAATTGGTGGCAACCTTGATAGCTGTCTATGCACATATCAGCTTTGCTGATATACGAGGGATTGGATGGGGTTGGGCAGGTGTCATATGGTTATACAGTTTAGTCTTCTATATCCCTCTGGACATTATCAAGTTCATTGTGCGCTATGCCTTGAGTGGAGAAGCCTGGAATCTCTTATTTGATAAAAAGACTGCTTTTACTTCAAAGAAAGATTATGGAAAGGAAGATAGAGCTGCAAAATGGATTCTTTCTCAGGGAAGCCTACAAGGATTGAATACCATAAGCTCACGGGTCAATGTAAGCAGATCATCTTTATTGGCAGAACAGGCCAAGCGAAGAGCTGAAATAGCCAGGCTGGGAGAATTGCATACTCTGAGGGGATATGTGGAGTCTGTAATGAGACTGAAAAATTTGGACCATAGTTTGATCCGATCAGCTTACACAGTTTAA 3108 0.4218 MQIYLAITESFKTGSHPPAKIFTNPFRYMELTLLSISLYDLSSHFHYFAHWLKRDLKLLTSPALVVVPLVLLLSLFLKCGTSCYNMAEELDKPLLEPESFSREGIDLVRIPLEEVFEHLRTSRRGLSTEDAEARLLIFGPNKLEEKKENKILKFFSFMWNPLSWVMEAAAIMAIVLANGGGEGPDWQDFVGIMCLLVINSTISFIEENNAGNAAAALMAHLAPKTKVLRDGRWQEQDASILVPGDVISIKLGDIIPADARLLEGDPLKIDQSSLTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVQTFFGKAAHLVDSTEVVGHFQKVLTAIGNFCICSIAVGMVLEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDRSLIEVFNRNMDRDKVVLLAARAARLDNQDAIDSAIVNMLSDPKEARANITEVHFLPFNPVDKRTAVTYIDSEGNWYRASKGAPEQILSICQEKDEIAGKVHAIIDKFAERGLRSLAVAYQEVPEKSKDSPGGPWTFCGLLPLFDPPRQDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDEYEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHIVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADLVLTEPGLSVIISAVLTSRSIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALITVLFYWVIVKTTFFETHFHVASISSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFMERPGVLLMCAFVIAQLVATLIAVYAHISFADIRGIGWGWAGVIWLYSLVFYIPLDIIKFIVRYALSGEAWNLLFDKKTAFTSKKDYGKEDRAAKWILSQGSLQGLNTISSRVNVSRSSLLAEQAKRRAEIARLGELHTLRGYVESVMRLKNLDHSLIRSAYTV 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1562 1035 FunFam Plasma membrane ATPase 572 726 - -
Mibi11g1562 1035 SFLD Haloacid Dehalogenase 402 729 - -
Mibi11g1562 1035 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 653 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 192 441 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 PRINTS H+-transporting ATPase (proton pump) signature 709 734 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 PRINTS H+-transporting ATPase (proton pump) signature 536 554 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 PRINTS H+-transporting ATPase (proton pump) signature 650 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 PRINTS H+-transporting ATPase (proton pump) signature 678 694 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 PRINTS H+-transporting ATPase (proton pump) signature 850 871 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1562 1035 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 125 896 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi11g1562 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Mibi11g1562 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 106 937 IPR023298 -
Mibi11g1562 1035 SUPERFAMILY Calcium ATPase, transduction domain A 223 320 IPR008250 -
Mibi11g1562 1035 FunFam ATPase 4 plasma membrane-type 668 905 - -
Mibi11g1562 1035 SFLD p-type atpase 402 729 IPR044492 -
Mibi11g1562 1035 Gene3D - 432 579 IPR023299 GO:0000166
Mibi11g1562 1035 SUPERFAMILY HAD-like 416 725 IPR036412 -
Mibi11g1562 1035 SMART Cation_ATPase_N_a_2 106 178 IPR004014 -
Mibi11g1562 1035 Gene3D - 987 1035 - -
Mibi11g1562 1035 CDD P-type_ATPase_H 125 931 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi11g1562 1035 Pfam E1-E2 ATPase 221 399 - -
Mibi11g1562 1035 Gene3D - 223 307 - -
Mibi11g1562 1035 Pfam Cation transporter/ATPase, N-terminus 110 172 IPR004014 -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 678 697 - -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 701 713 - -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 270 284 - -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 596 606 - -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 574 585 - -
Mibi11g1562 1035 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Mibi11g1562 1035 Gene3D - 185 905 - -
Mibi11g1562 1035 FunFam Plasma membrane ATPase 432 579 - -
Mibi11g1562 1035 FunFam Plasma membrane ATPase 223 307 - -
Mibi11g1562 1035 Pfam haloacid dehalogenase-like hydrolase 416 692 - -
Mibi11g1562 1035 Gene3D - 417 715 IPR023214 -
Mibi11g1562 1035 PANTHER CALCIUM-TRANSPORTING ATPASE 114 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1562 Mibi-ChrMibi11 35794976 35804485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1562 86 1035 Primary Pumps ATPases AT1G17260 79.789 0.0 1538