Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1558 ATGGAGGATCGGCGAGTTTCGCCGGCGGTGTTCATCGGCACCTGCATTCTGAGTTGGATGCTTGTTTCCGTCAATGGAGACACAGATCAAACTGATGTCGCTGCTTTACAGGCTATGTTTACTGGCATGAACTCACCGTCCCAACTAGGTTGGCCAGCAAATGGTGGGGATCCATGTGGGGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTCGGTTACCAATTACAGACCATGACATCTGTGACCAACCTAGATATGAGTAACAATAATTTTGGAGGTTCCGTGCCATACCAACTTCCACCAAAGTTGCTGAGATTAGATCTCTCCAACAACCAATTCACTGGGAGTTTACCGTATTCAATTGCTGATATGACTTCTCTTACATACCTAAGTGTTTCTCACAATCAACTACAGAACGGACTGAGTGACACGTTTCAAAAGCTTTCTAATCTAGCCACACTGGATCTCTCTTTCAATTCTCTGTCAGGCAGCCTCCCACAGAGTTTCAGCTCACTTTCAAGCATGAGCAACATGAATCTGCAAAACAATCAGTTTTCAGGGACTATTGATGTCCTCTCCAATCTTCCTCTTGATACTCTGAATGTGCAAAACAACCAATTTACAGGCTGGATACCTGAACAGCTGAAGAGCATTAATATCCAGACATCAGGAAATATGTGGAACTCAGGTCCTGCCCCCCCTCCACCTCCAGGGACGCCCCCTGCAAGTAGTAGGAACCGGCATCACAAATCTGATGGAAGTAATAGCTCTTCAAATGATGGCACCAGTGATGGGGAGAAAAAATCTGGTATAGGAGGTGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCAGTGGTTGCTTTCTTTTTGGTGAGAAGAAAATCCAGGAAGTCATCGTCAGATATAGAAAAGCATGACAATGAGCCTTTTGCTCCTCTCAGTTCAAATGAAGTGCATGAAGTGAAGTCTGTGCAAGCTCCCTCTGTGATTGACATAAACACATTTGATACCACTGCCTCCATAAATATTAAACCCCCACCTATTGAACGTCACAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACCGTAAAAGCTCCTGCAAATGTGAAATCATATTCTATAGCAGACCTACAGATTGCCACTGGGAGCTTCAGTATGGATAACCTCCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCATCTATCCTTCCCCATGATTCTGATGATTTTATGGAAATAGTTTCAAACATCTCCAACTTGCACCATCCAAATGTGACAGAGCTTTTTGGTTATTGTTCAGAGCATGGACAACACCTTCTAGTCTACGAGTTTCATAAAAATGGATCACTACATGACTTCCTCCACTTATCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATTCAGAGCTCAATCCTCATCTATCGGACTCAGGATTGGCTAGCTATATTCCAAATGCTGACCAGGTCTTGAACCGTAATGCTGGATCTGGGTATGATGCACCTGAAGTTGCTTTGTCTGGTCAACATACTTTGAAGAGCGATGTTTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGACCAAGATCAGAGCAATCTTTAGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGACCCTGCTCTGGAGGGGCTATACCCTGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCTCTCTGTGTTCAGCCGGAGCCCGAATTCCGACCACCTATGTCGGAGGTGGTTCAAGCATTGGTTCGATTAGTGCAGCGAGCTAACATGAGCAAGAGGACATTTGGAACAGATCAAGGAGGATCCAATCGAGGTGGGGATGATCTAGACACACAGGATATGTAA 2151 0.4365 MEDRRVSPAVFIGTCILSWMLVSVNGDTDQTDVAALQAMFTGMNSPSQLGWPANGGDPCGGQSWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTNLDMSNNNFGGSVPYQLPPKLLRLDLSNNQFTGSLPYSIADMTSLTYLSVSHNQLQNGLSDTFQKLSNLATLDLSFNSLSGSLPQSFSSLSSMSNMNLQNNQFSGTIDVLSNLPLDTLNVQNNQFTGWIPEQLKSINIQTSGNMWNSGPAPPPPPGTPPASSRNRHHKSDGSNSSSNDGTSDGEKKSGIGGGGIAGIVISILLVGAVVAFFLVRRKSRKSSSDIEKHDNEPFAPLSSNEVHEVKSVQAPSVIDINTFDTTASINIKPPPIERHKSFDEDEFSKKPIIVKKTVKAPANVKSYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSDDFMEIVSNISNLHHPNVTELFGYCSEHGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDSELNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQHTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGGDDLDTQDM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1558 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 697 - -
Mibi11g1558 716 MobiDBLite consensus disorder prediction 318 337 - -
Mibi11g1558 716 SMART LRR_typ_2 95 123 IPR003591 -
Mibi11g1558 716 SMART LRR_typ_2 141 164 IPR003591 -
Mibi11g1558 716 SMART LRR_typ_2 165 188 IPR003591 -
Mibi11g1558 716 PRINTS Leucine-rich repeat signature 120 133 - -
Mibi11g1558 716 PRINTS Leucine-rich repeat signature 165 178 - -
Mibi11g1558 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Mibi11g1558 716 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Mibi11g1558 716 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Mibi11g1558 716 Gene3D Ribonuclease Inhibitor 29 251 IPR032675 -
Mibi11g1558 716 Gene3D Phosphorylase Kinase; domain 1 375 488 - -
Mibi11g1558 716 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515
Mibi11g1558 716 PANTHER LEUCINE RICH REPEAT KINASE 2 72 690 - -
Mibi11g1558 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 488 - -
Mibi11g1558 716 MobiDBLite consensus disorder prediction 239 286 - -
Mibi11g1558 716 Gene3D Transferase(Phosphotransferase) domain 1 490 703 - -
Mibi11g1558 716 SUPERFAMILY L domain-like 31 232 - -
Mibi11g1558 716 CDD STKc_IRAK 418 686 - -
Mibi11g1558 716 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1558 716 SUPERFAMILY Protein kinase-like (PK-like) 396 683 IPR011009 -
Mibi11g1558 716 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Mibi11g1558 716 MobiDBLite consensus disorder prediction 695 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1558 Mibi-ChrMibi11 35713504 35721031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1558 15 715 Strubbelig Receptor Gene Family AT1G53730 66.154 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mibi11g1558 PK_Tyr_Ser-Thr 6.6e-42 CL0016