Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1553 ATGGGTGACTCATTAGCATCTGATGATAGATTAACCGAATCTCCAGCAGTTGAAGTGACTGGAAAAATCATGGTTTTAGCTATAATTATCCTCTTCATGGTGATTGTGTTTGTTCTTTTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACCCCTCCTCCGCCGCCTCGCCGGCGCCGGCGCCGCCGTTTTGTCTTCGCCCCCGGACAAGATCCGGCGATCTATGGCGGCGGCCAAAGAAGTGGACTTGATGCTTCTGTGCTTTTGTCATTGCCAGTTTTAGTTTACCAACCTGAGAATTTCAAAGATGGGTTGGAATGTGCTGTGTGTCTCTCTGAGTTTGTTGAAGGAGAAAAGGCTAGGCTTTTACCCAAATGTAATCATGGGTTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCTACTTGTCCTCTTTGTAGAAACCCAATTGCTTCTGAAGCCCCTAAATGTAATAGCAGTCCAAGTGTTCGAGAAAATTCCGCAGAGAATAATGTTATTGGTAGCCAATCACAAGCTTCAGAGAATTTTCAAAATCCAGCTTTAGTTGCTATGAGTGGTTCTTCTTCAGAGTCTCCAAATTTTCCTACTAATGTGTTGGTTTGGGGGAACCAGACTCAAGTTAGTTCTATTAATACATCTTTGGAAGAAGAGGGTACTTCAACATCATCTTCATCTTCTTCCTCTACCGCTACAACAGCTAGCGGTAGTGGCAGTAACAATAGGCGTGAAATGATGGTGATTGAGATAACAAGTGAGGTCAATTCTTCATCTTTGTTATCTCCTTCTGCAAGCAGGTTTGCTGAAGATGAGCTGAAATCTCCAATGACCACAAGATTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTTTAATCCTGGTCCTGGCTCTATAGATGTGGAACAAGCTGGGAGAGGACAAAGCTAG 981 0.4343 MGDSLASDDRLTESPAVEVTGKIMVLAIIILFMVIVFVLFLHLYAKWFWWSIEETTPPPPPRRRRRRRFVFAPGQDPAIYGGGQRSGLDASVLLSLPVLVYQPENFKDGLECAVCLSEFVEGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPIASEAPKCNSSPSVRENSAENNVIGSQSQASENFQNPALVAMSGSSSESPNFPTNVLVWGNQTQVSSINTSLEEEGTSTSSSSSSSTATTASGSGSNNRREMMVIEITSEVNSSSLLSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLGPFNPGPGSIDVEQAGRGQS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1553 326 MobiDBLite consensus disorder prediction 296 326 - -
Mibi11g1553 326 CDD RING-H2_EL5_like 111 154 - -
Mibi11g1553 326 MobiDBLite consensus disorder prediction 225 255 - -
Mibi11g1553 326 FunFam RING-H2 finger protein ATL3 81 159 - -
Mibi11g1553 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 163 IPR013083 -
Mibi11g1553 326 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Mibi11g1553 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 19 258 - -
Mibi11g1553 326 SMART ring_2 112 153 IPR001841 -
Mibi11g1553 326 Pfam Ring finger domain 111 154 IPR001841 -
Mibi11g1553 326 SUPERFAMILY RING/U-box 95 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1553 Mibi-ChrMibi11 35678741 35679721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1553 18 304 C3H Transcription Factor Family AT1G53820 44.186 4.92e-68 213