Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1549 ATGACCAAAACGGAACAAGTCTCCACCGGAATTTCCATTCCCGGCAACCAAATTTCAATGTCCAAAAACAAGAACAAAAAGCTCCTCTTCCTCACTCTCATCACAACCCTCCTCCTCTTCTCCGCCGCCACCGCCATCGGCATCGCCGTCTCCCGGAAAAACCCCGGTGAAGAAACCGCGGCCCATGCCGTCGCCAGAACCGCCTGCGCCGCCACCCTCCACCCCGAACTCTGCTTCTCCGCCGTCGCCGCCGAGCCCGGCTTCGCCCAAAAAGTCACCACAAAAAAAGACGTCATAGAATTATCCCTCAACATAACCATAAGAGCCGTACAACACAATTACTTCACCGTCAAGAAACTTCAGCAAACCACCAAATCCCTCACCAAGAGAGAGAAAACCGCCCTCCACGACTGCCTCGAGACCATAGACTACACCCTCGACGAGCTTCACCGTGCCGTCGCCGACCTCCGGGACGCCGGCGCCGGCGCCGGCCAGCACGCCGACGACATCAAAACCCTAATCAGTGCCGCCATAACCAACCAGGAAACTTGCCTCGACGGATTCTCCCACGACGGCGGCGACAAGCGTGTCCGCCACGGGCTCGTCGCCGGCCAGCTTCACGTCGAGCGCATGTGCAGCAACGCGCTCGCCATGATGAAGAACATGACGGATGGAAGGGGTCGGAGATTGGCGGGGGCGGAGGGATTTCCCGGCGCCGTCGCCGGCGACGGAGTTGGGTGGCCGGAGTGGATGTCGGCGGGGGACCGGAGGATTTTGCAGGCGACGACGGTGGCGGCGAATGTGGTGGTGGCGGCGGACGGGAGCGGGGATTATAGGACGGTGTCGGAGGCGGTGGCGGGGGCGCCGGAGGGGAGTGGTACGAGGTATGTGATAAGGATAAAGGCTGGGGTTTATAGGGAGAATGTGGAGGTGACGAAGAAGAAGACGAATATAATGTTTGTGGGAGATGGAAGAACAAGTACTATCATAACTGGAAGTAGGAATGTTGTTGATGGAAGCACAACTTTTCACTCTGCAACTGTAGCGGTGGTAGGAGAACGTTTCTTGGCAAGGGACATAACCTTCCAAAACACGGCGGGTCCGTCGAAGCACCAGGCGGTGGCTCTCCGGGTCGGAGCGGACCTCTCCGCCTTCTACCGGTGTGACATCCTCGCCTACCAGGACTCCCTCTACGTCCACAGCAATCGCCAGTTCTTTGTGAGTTGCCTAATAGCCGGCACCGTTGACTTCATCTTTGGAGACTCCGCAGTCGTCCTACAAAACTGCGACATCCACGCCCGCCGCCCCAACGCCGGCCAGAGGAACATGGTCACCGCACAAGGCAGAGTTGACCCTAACCAGAACACCGGCATTGTCATCCAAAACTGTAGAATTGGTGCCACCCAGGATCTATTGGCAGTGAAGGGAAGTGTGGAGACATACTTGGGAAGGCCATGGAAGGAGTATTCAAGGACAGTGATAATGAAGAGTGAAATAAGCGACGTGATACACCCAAGTGGATGGTTCCCTTGGGATGGGAATTTTGCCTTGAACACTTTATTCTATGGGGAACATCAAAATACAGGATCTGGTGCTGTTACTTCTTCCAGAGTTAATTGGAGAGGATTTAAGGTTATTACTAGTGCCACTGAAGCGCAGAGTTTTACTCCTTCCAACTTCATTGCTGGCTCAAGCTGGTTGCCTTCTACTGGCTTCCCTTTTACCCTTGGCCTTTGA 1737 0.5573 MTKTEQVSTGISIPGNQISMSKNKNKKLLFLTLITTLLLFSAATAIGIAVSRKNPGEETAAHAVARTACAATLHPELCFSAVAAEPGFAQKVTTKKDVIELSLNITIRAVQHNYFTVKKLQQTTKSLTKREKTALHDCLETIDYTLDELHRAVADLRDAGAGAGQHADDIKTLISAAITNQETCLDGFSHDGGDKRVRHGLVAGQLHVERMCSNALAMMKNMTDGRGRRLAGAEGFPGAVAGDGVGWPEWMSAGDRRILQATTVAANVVVAADGSGDYRTVSEAVAGAPEGSGTRYVIRIKAGVYRENVEVTKKKTNIMFVGDGRTSTIITGSRNVVDGSTTFHSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDILAYQDSLYVHSNRQFFVSCLIAGTVDFIFGDSAVVLQNCDIHARRPNAGQRNMVTAQGRVDPNQNTGIVIQNCRIGATQDLLAVKGSVETYLGRPWKEYSRTVIMKSEISDVIHPSGWFPWDGNFALNTLFYGEHQNTGSGAVTSSRVNWRGFKVITSATEAQSFTPSNFIAGSSWLPSTGFPFTLGL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1549 578 ProSitePatterns Pectinesterase signature 1. 292 311 IPR018040 -
Mibi11g1549 578 PANTHER PECTINESTERASE 43 568 - -
Mibi11g1549 578 FunFam Pectinesterase 261 578 - -
Mibi11g1549 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 223 IPR035513 -
Mibi11g1549 578 CDD PMEI-like_3 67 223 - -
Mibi11g1549 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 223 IPR035513 -
Mibi11g1549 578 Gene3D - 261 578 IPR012334 -
Mibi11g1549 578 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Mibi11g1549 578 Pfam Pectinesterase 267 563 IPR000070 GO:0030599|GO:0042545
Mibi11g1549 578 SUPERFAMILY Pectin lyase-like 262 577 IPR011050 -
Mibi11g1549 578 FunFam Pectinesterase 61 223 - -
Mibi11g1549 578 Pfam Plant invertase/pectin methylesterase inhibitor 66 218 IPR006501 GO:0004857
Mibi11g1549 578 SMART PMEI_2 60 218 IPR006501 GO:0004857
Mibi11g1549 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 222 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1549 Mibi-ChrMibi11 35635825 35642160 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1549 24 578 Carbohydrate Esterase AT3G14310 66.494 0.0 758