Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1547 ATGTTGAAGGAGTTTGAGGTTTGTGATGGTGCAGTTGTAACGGGAGACGGATTCCTGGCTCGAGAGATAACATTGCCGTGGCTCTCAGAGCCGGTTCCGACCTCGCTGCCTTTTACCAGTGCGCCTTCTTGGCATACCAAGACACACTTTACGTCCACATACAGCAACCGCCAGTTCTTTACCGACTACATGGTTGTCCGCACCGATCTGGCGCAGTATAAGGGAAGTGTGAAATCATACTTGGGGCGGCCATGGAAGGAATATGCAAGGACAGTGGTAATGGAAACTTATATAGACAATGTGATAGACCCAGCAGGGTGGCATGAATGGGATGGAGACTTTGCATTGGACACATTGTTCTATGGTGAGTATAAAAACACTGGAACTGGTGCTGATACCTCTAAAAGGGTCAGTTGGAAAGGCTTCAAGGTTATTACTAGTTCTTCTGAAGCTGAAGCTTATACTCCTAAAAACTTCATTGATGGCAACAACTGGATTCCTTCCACGGGTTTCCGTATACTCCTGGCCTATGACTTTAATGATACTACTCCTAATCCTTAA 561 0.4617 MLKEFEVCDGAVVTGDGFLAREITLPWLSEPVPTSLPFTSAPSWHTKTHFTSTYSNRQFFTDYMVVRTDLAQYKGSVKSYLGRPWKEYARTVVMETYIDNVIDPAGWHEWDGDFALDTLFYGEYKNTGTGADTSKRVSWKGFKVITSSSEAEAYTPKNFIDGNNWIPSTGFRILLAYDFNDTTPNP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1547 186 PANTHER PECTINESTERASE 72 167 - -
Mibi11g1547 186 SUPERFAMILY Pectin lyase-like 65 172 IPR011050 -
Mibi11g1547 186 Pfam Pectinesterase 67 163 IPR000070 GO:0030599|GO:0042545
Mibi11g1547 186 Gene3D - 38 176 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1547 Mibi-ChrMibi11 35603437 35604930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1547 68 170 Carbohydrate Esterase AT1G11580 66.019 1.85e-43 150