Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1537 ATGAAACTCAGAATTATAAAAAACCCTCAACAACATCTCTTCTCATTTCCAAAGAAGAAGCCAAGAAAAAAAAATTTAAAGTTTACATTTTTATCTGTTGTAAGGAAGAAAAATCTCTGCAGAGAAGGTGATACAATCATGTGTGGTGGTGCTATTATCTCTGACTTCATTCCTGCGGCGGCGGTTGCGGCGGCCGGAAGAGGAGGAAGGTCTCGCAGGCTCACAGCTGATTATCTGTGGCCAGATTTGAGCAAGCTTGTTGGGTCTGATAGGAGATTTTCCAAACCCTTGAAGCCTGAAAGTGTCATCGACTTGGACGATGATTTTGAAGCTGATTTCAGGGAATTTAAGGATGATTCTGATATTGATGTTGATGAAGATGATGATGATTTGATGATTGATGTGAAACCCTTTGCTGCTTCTGGCATTAAGCACTCTAAGAAGCCCTTGTCTCGTGGATCTGCTGCTGTTGCTGCAAAACCTGAGAAATCTGATTTGCAAGCTGAGAAGTCCCTGAAAAGGAGGAGGAAGAATCAATACAGGGGAATCCGCCAGCGCCCATGGGGTAAATGGGCGGCTGAGATTCGTGACCCAAGAAAGGGGGTTCGTGTTTGGCTCGGAACCTTCAACACCGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGACGGATCCGTGGCAAGAAAGCCAAGGTTAACTTCCCTGATGAGGTGGCCTCAGGTTCTTCTTCAAAGCGTCTCAAGACCAAAGTCGAGAAGCCGGTCCCAAAGGCCAATCTGAACTCTGTTCAGCCCAATTTCACCCAAAACTTCAATGCTGAAACCAATCTGGAGGACTATTACTACTCTATGGGTCTGATGGAACAGAAACCTCAGATTAACCAATTTGCTGCTGCTAACATGGGATCCTTCCCCAAGACCAACGTTAACAACGTGGTCCCATCACCTTTATCATCTGATGATGTCACTGCCTATTTCAGCTCTGATCAGGCGAGCAACTCATTCGATTACTCTGACTTTGTATTCAGCGAACAGGCTCCAAAGACCCCAGAAATCTCATCCATGCTTTCTGGTGAATCTCAGTACCTGCAAGATTCCAACCAGAACGCCAACACCAACAACAACATGCAATACTCAGACTCTGAGAATGTGATGCCTTCCAGCAATGATTCCGGAAAGAGCCTTTCGGATGAACTCGCTGACATTGAATCCCAACTGAAATTCTTCGAGGCACCTTACCTCGAAGGAAGCTGGGATGATGCTTCACTGGGAAGCCTGCTTGGTGGGGAGACAACACAGGATGCTGCTAACAACCCAATGAGCCTCTGGAGCTTTGATGACCTTCCTCCATCCATGATGGGGGGAGTTTACTGA 1377 0.4633 MKLRIIKNPQQHLFSFPKKKPRKKNLKFTFLSVVRKKNLCREGDTIMCGGAIISDFIPAAAVAAAGRGGRSRRLTADYLWPDLSKLVGSDRRFSKPLKPESVIDLDDDFEADFREFKDDSDIDVDEDDDDLMIDVKPFAASGIKHSKKPLSRGSAAVAAKPEKSDLQAEKSLKRRRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEVASGSSSKRLKTKVEKPVPKANLNSVQPNFTQNFNAETNLEDYYYSMGLMEQKPQINQFAAANMGSFPKTNVNNVVPSPLSSDDVTAYFSSDQASNSFDYSDFVFSEQAPKTPEISSMLSGESQYLQDSNQNANTNNNMQYSDSENVMPSSNDSGKSLSDELADIESQLKFFEAPYLEGSWDDASLGSLLGGETTQDAANNPMSLWSFDDLPPSMMGGVY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1537 458 Gene3D AP2/ERF domain 178 237 IPR036955 GO:0003700|GO:0006355
Mibi11g1537 458 ProSiteProfiles AP2/ERF domain profile. 179 236 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 FunFam Ethylene-responsive transcription factor 2 178 237 - -
Mibi11g1537 458 PRINTS Ethylene responsive element binding protein signature 202 218 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 Pfam AP2 domain 179 228 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 SUPERFAMILY DNA-binding domain 179 238 IPR016177 GO:0003677
Mibi11g1537 458 SMART rav1_2 179 242 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 CDD AP2 179 237 IPR001471 GO:0003700|GO:0006355
Mibi11g1537 458 MobiDBLite consensus disorder prediction 352 397 - -
Mibi11g1537 458 PANTHER DNA-BINDING DOMAIN 163 367 IPR044808 GO:0003700|GO:0009873
Mibi11g1537 458 MobiDBLite consensus disorder prediction 144 180 - -
Mibi11g1537 458 MobiDBLite consensus disorder prediction 352 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1537 Mibi-ChrMibi11 35471805 35475873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1537 47 458 AP2-EREBP Transcription Factor Family AT1G53910 45.564 5.63e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi11g1537 AP2 2.5e-12 CL0081