Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1520 ATGGCCACAACAACCACCGCCGCCGCCGCCGCCGCAGCACCTCGGCATTTGTCGCAGAGGGAGGTCGACATCCAAATGATGTTGGCCGCCGAGGTCCATTTAGGAACCAAAAATTGTGATTTCCAGATGGAGAGATATGTATTTAAGCGCCGAAACGATGGTATTTATATCATTAATCTTGGCAAGACATGGGAGAAGCTCCAGCTTGCTGCAAGGGCGATTGTTGCCATAGAAAACCCCCAGGATATAATTGTTCAGTCTGCCAGACCTTATGGTCAGAGAGCAGTTCTCAAGTTTGCCCAGTACACTGGTGCCCATGCAATTGCAGGAAGGCACACCCCAGGAACATTCACTAATCAGCTCCAGACGTCCTATAATGAGCCCCGCCTCCTCATCCTCACTGATCCAAGAACAGATCATCAGCCTATCAAGGAAGGAGCTCTTGGAAATATCCCAACTATTGCCTTCTGTGACACTGATTCTCCTATGGGATATGTTGACATTGGGATTCCTGCAAATAATAAGGGCAAGCATAGCATTGGTTGTCTCTTTTGGCTTCTAGCAAGGATGGTTTTGCAGATGCGTGGCACCATCCGTCCAGGGCATAAGTGGGATGTGATGGTGGATTTATTCTTCTATAGAGAACCAGAAGAGGCTAAGCAACAAGAGGAGGATGAAACAGCTCCTGTACAAGATTACGCCATTGCTGACTTCAATGCTGCAATTGGTGGCCTTCCTGCCGATGGCCAGTGGCCCAGCACAGCTGATCAACCATGGACTGATGCTGCGCCTCAACCTATTCCAGCCGTTCCTGGTGTCAACTGGACTGCTGAAGCTGCTACTGGAGATTGGGGAGAATCTGTTCCTGCGCCACAAGTATCTGCCCCTGTGATTGAATCTGCTCCTGCTGCTGGCTGGGAATAA 924 0.4989 MATTTTAAAAAAAPRHLSQREVDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARAIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEDETAPVQDYAIADFNAAIGGLPADGQWPSTADQPWTDAAPQPIPAVPGVNWTAEAATGDWGESVPAPQVSAPVIESAPAAGWE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1520 307 Pfam Ribosomal protein S2 124 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 Pfam Ribosomal protein S2 27 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 MobiDBLite consensus disorder prediction 282 307 - -
Mibi11g1520 307 CDD RPS2 27 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 FunFam 40S ribosomal protein SA 23 229 - -
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mibi11g1520 307 PANTHER 40S RIBOSOMAL PROTEIN SA 13 294 IPR005707 GO:0003735|GO:0006412|GO:0015935
Mibi11g1520 307 SUPERFAMILY Ribosomal protein S2 20 209 IPR023591 -
Mibi11g1520 307 Hamap 40S ribosomal protein SA [rps-0]. 11 278 IPR027498 GO:0003735|GO:0006412|GO:0015935
Mibi11g1520 307 Gene3D - 23 228 - -
Mibi11g1520 307 TIGRFAM uS2_euk_arch: ribosomal protein uS2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1520 Mibi-ChrMibi11 35031476 35033985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1520 7 307 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.957 4.84e-152 425