Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1517 ATGGCGAATGGAGAAGATAAAGGCAATGACTTCTATGCTGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAATTGCTTACAAGAAACTCGCAATGAAATGGCACCCTGATCGTTTTTCTGCATCGGGGAATTCAAAGTTCGTGGATGAAGCTAAGAAGAAATTCCAGACAATTCAGCAAGCCTATTCTGTTTTATCTGATGCGAATAAGAGGTTCTTGTATGACATAGGGGTATATGACAGCGATGACGACGACAATGGGATGGGAGATTTCTTGAACGAAATGGCGGCCATGATGAGCCAAACAAAACCAAATGAAAGTGGGGAAGAGAGCTTTGAGGAGTTGCAACAACTGTTTGAAGATATGTTTCAAGCTGACATTGGAATATCTACAAGTGACTCCCACACTGTTGGTTCTTGTTCTACATCATCTACCTACGTTACATACTCCGAAACTACTTCCGGTAGTTCAAACAAACGTAATTCCTCGGAGATGAATGTCGGGAAGAATGGGGAGTCATCTGCTCACTTTGAAGCCTCCTTCCAGGACTTTTGTTTAGGGGTGGATCGGCTACAAGACATAAAGAAGGGAGGAGGAGGAGTACGAGGAACAGGTAGTAGCAGTAAGAGAAGACATGGGAGGAAGCAAAAGGTAGCATCTGGACATGATGTTTCCTCTAATGACTTTTCCAGTATTTCTGCACAGTGA 717 0.4338 MANGEDKGNDFYAVMGLDKECTESELRIAYKKLAMKWHPDRFSASGNSKFVDEAKKKFQTIQQAYSVLSDANKRFLYDIGVYDSDDDDNGMGDFLNEMAAMMSQTKPNESGEESFEELQQLFEDMFQADIGISTSDSHTVGSCSTSSTYVTYSETTSGSSNKRNSSEMNVGKNGESSAHFEASFQDFCLGVDRLQDIKKGGGGVRGTGSSSKRRHGRKQKVASGHDVSSNDFSSISAQ 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1517 238 MobiDBLite consensus disorder prediction 223 238 - -
Mibi11g1517 238 Gene3D DnaJ domain 7 137 IPR036869 -
Mibi11g1517 238 SMART dnaj_3 9 73 IPR001623 -
Mibi11g1517 238 CDD DnaJ 10 70 IPR001623 -
Mibi11g1517 238 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Mibi11g1517 238 MobiDBLite consensus disorder prediction 198 238 - -
Mibi11g1517 238 Pfam DnaJ domain 10 78 IPR001623 -
Mibi11g1517 238 PANTHER PUTATIVE, EXPRESSED-RELATED 2 209 - -
Mibi11g1517 238 PRINTS DnaJ domain signature 12 30 IPR001623 -
Mibi11g1517 238 PRINTS DnaJ domain signature 30 45 IPR001623 -
Mibi11g1517 238 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mibi11g1517 238 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Mibi11g1517 238 MobiDBLite consensus disorder prediction 151 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1517 Mibi-ChrMibi11 34990746 34993931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1517 12 78 C2H2 Transcription Factor Family AT1G74250 42.647 5.40e-10 57.0