Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1506 ATGTCGAAATTTCCCGACACGGCTGTGGATAGCCGGAGACAAGGAAAGGCGCCGGAGAGGTCTAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAACGAGGGTCTGGATCTTTAAGCCTTGGAATTTCTGGGAAAATGGAATCTAGAGCAATTACGAAGGACTTGAAGACAAACCTGGAAAATCGTGACAATTCACTGAGACTTAATGCTTCATCTATGGAATGTCTTCCCCAGTTTGTGGAAAACGCCTGCATCAAGAAGTCTGATTCGAGGTCAGACCCTGAACCCCAAATGACAATATTTTATGCCGGAAAAGTGTTAGTGTTTGATGCTTTTGCTCCTGAGAAGGCCACGGAGATCATGGAGCTAGCCACCAAATTAAGCTCTGATGCTACTAATACTGACACTAACAAGAACCTCCCTAGTGCATCTACTGCTAAAGAAAATCAGGATGCGGCCAAAGTGCCTCAAAACAACACTGCTCAGGAACAGGCAGTCGCTAAATCTGGACCTGCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAATTCCTTGAGAAGAGAAAAGAAAGGGTGATAGCTAAAGGACCTTACCAGCTGAACAATCCAAATAGTCCAAAGCCAGATGGAAGCAGTTCAGGAGGAGATCCTGATCAAGGCCAGTCTTCCAAATCATTTGACCTTAACCTATAG 723 0.444 MSKFPDTAVDSRRQGKAPERSNFTQYCNVLSQLLKEKRGSGSLSLGISGKMESRAITKDLKTNLENRDNSLRLNASSMECLPQFVENACIKKSDSRSDPEPQMTIFYAGKVLVFDAFAPEKATEIMELATKLSSDATNTDTNKNLPSASTAKENQDAAKVPQNNTAQEQAVAKSGPAPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNNPNSPKPDGSSSGGDPDQGQSSKSFDLNL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1506 240 Pfam Jas motif 187 209 IPR018467 -
Mibi11g1506 240 MobiDBLite consensus disorder prediction 203 240 - -
Mibi11g1506 240 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Mibi11g1506 240 SMART tify_2 96 131 IPR010399 -
Mibi11g1506 240 MobiDBLite consensus disorder prediction 136 186 - -
Mibi11g1506 240 MobiDBLite consensus disorder prediction 208 240 - -
Mibi11g1506 240 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 217 IPR040390 -
Mibi11g1506 240 MobiDBLite consensus disorder prediction 136 171 - -
Mibi11g1506 240 Pfam tify domain 101 129 IPR010399 -
Mibi11g1506 240 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1506 Mibi-ChrMibi11 34864096 34866402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1506 9 213 Tify Gene Family AT1G19180 34.583 1.15e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mibi11g1506 tify 1.2e-14 No_clan