Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1477 ATGCCTCCTTTTAGAAGAATTCTCTTGAAAAGCTTCGTTCTTGGCTGCTTCAAAGCCAAAATTCGTCAATCTTCATCCTTATGTTCTGCAACTAAGAATCATAGGAACAATAGTAAGGTGAGCTCAAGAAGATTGTGTCTTTCTGATTTGAGCAATTCTTCTTCCCTCTCTTTCATGAGTGACCTTTCAAATTCTGTTCTGGGTTCAAATCTTCATATCTTCACCCTCAAGGAGCTCAAGGAGATCACTCACAATTTCTGCAAATCCACTGTTGTTGGTGAAGGTGGGTTTGGTAAAGTTTATAAAGGCTTCATTGATGATAAGCTTAGGCCTGGTTTGAAGCCTCAAGTTGTTGCAGTTAAGGTTTTGGATTCTGATAGCAAACAGGGTCACAGAGAGTGGTTGGCTGAAGTGATATTTCTGGGGCAATTGAAGCATCCCCATTTGGTGAACTTGATTGGATATTGCTGTGAAGATGAACACAGGCTTCTGGTTTACGAATACATGGAGAGAGGAAATCTAGAGAACAAGCTTTTCAAGGGTTACTTAGCAGCCTTGCCTTGGCTCACAAGAATCAAAATAGCAATTGGAGCTGCAAAAGGACTTGCTTTCCTTCATGAAGAAGACCAACCTGTCATCTACAGAGACGTCAAAGCCTCAAACATCTTATTAGATGCAGATTACAATGCTAAGCTCTCGGATTTTGGTCTCGCCATAGATGGACCCGAAGAAAACAAGATTCATATCACAACTAGTGTTATGGGTACTCATGGTTATGCAGCTCCCGAGTACATCACATCTGGTCATTTGACAACCATGAGTGATGTGTATAGTTTTGGGGTGGTTCTGCTAGAGCTGATCACAGGGAAGAAATCTGTGGATAAGAACAGACCAATCAGAGAACATGATTTGGTGGAATGGGCAAGACCATTATTAAGGGACTCAAATAAGCTCGAAAGAATAATGGACCCAAGACTAGAAGGTCAATATTCTTATGAAGGGGCTAGAAAAATGGCGTTTTTGGCTCACCAATGTCTCAGTCAGCAACCCAAGTCTAGACCTTCCATGAGAACCGTGGTTAAGACCTTAGAGCCACTTATGAAACTGGCTGATATACCAATGGGTTATTTTGTCTATGTGGTCCCCACTGCAGAAAATAAAACAGTTCAATGTGGGAATGAAAAAGGGTGTGAACAGAAGAAGGAGGAGGAGGAAATGGAGAAGACAAAGGAGGAGAAGAAGAAGAAGATGAGTACTATGGAGGGTGTTCAGAAGAATCAGAAAGGTCAAAGACGAAGACGTCATCAGATTAAGTTGCTGAGGTCATCTGGTTCTGTTCATTCTGATACTGCTCTGTACAAAGTTCTTGGTTCTAGCCTTTATTCTCCAAAGCAAGCATCACAATAA 1407 0.4151 MPPFRRILLKSFVLGCFKAKIRQSSSLCSATKNHRNNSKVSSRRLCLSDLSNSSSLSFMSDLSNSVLGSNLHIFTLKELKEITHNFCKSTVVGEGGFGKVYKGFIDDKLRPGLKPQVVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEENKIHITTSVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKKSVDKNRPIREHDLVEWARPLLRDSNKLERIMDPRLEGQYSYEGARKMAFLAHQCLSQQPKSRPSMRTVVKTLEPLMKLADIPMGYFVYVVPTAENKTVQCGNEKGCEQKKEEEEMEKTKEEKKKKMSTMEGVQKNQKGQRRRRHQIKLLRSSGSVHSDTALYKVLGSSLYSPKQASQ 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1477 468 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 169 373 - -
Mibi11g1477 468 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Mibi11g1477 468 Coils Coil 394 426 - -
Mibi11g1477 468 CDD STKc_IRAK 92 366 - -
Mibi11g1477 468 SUPERFAMILY Protein kinase-like (PK-like) 60 364 IPR011009 -
Mibi11g1477 468 MobiDBLite consensus disorder prediction 397 445 - -
Mibi11g1477 468 SMART serkin_6 86 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1477 468 PANTHER OS01G0588500 PROTEIN-RELATED 41 366 - -
Mibi11g1477 468 ProSiteProfiles Protein kinase domain profile. 86 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1477 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mibi11g1477 468 FunFam Serine/threonine-protein kinase BIK1 53 168 - -
Mibi11g1477 468 ProSitePatterns Protein kinases ATP-binding region signature. 92 121 IPR017441 GO:0005524
Mibi11g1477 468 Gene3D Transferase(Phosphotransferase) domain 1 169 372 - -
Mibi11g1477 468 Gene3D Phosphorylase Kinase; domain 1 50 168 - -
Mibi11g1477 468 MobiDBLite consensus disorder prediction 397 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1477 Mibi-ChrMibi11 34403259 34405103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1477 72 412 Glycoside Hydrolase AT3G07070 45.930 7.10e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi11g1477 PK_Tyr_Ser-Thr 6.2e-48 CL0016