Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1466 ATGTCCTCTCATGAACAAGCCCTAGTTTCCCTTTTCTCTCAGCTAGCTTTATCCTTCGACGGCGCCGTTTTAGGTCTCGCTTTGGCCTATGCAGCCGTACGGTCGGTCCTCAAGCTTACTTCTAACTCTGCCGCCCTCGATAAGCTTCGTGATGCACCTAGTGTCTCCGTTTCTGACCTCCGGTCGCTTCTGGAAAGTTCCGATGATAACGGTGATTCTTGTGATAAACTTGTTGTTGTTCGTGGCACTGTTGAGGCCAAGTCTGCTGTTGAGAATGGATGGAAAAGCTTGAGGCCTAGTGTTTTGGTTTCTCGTGAGTCTGGTGATGGTGCTGTTGCTATTCAGAGAACTCAGACGTGTATATATACTGAATGGAAGGGCTTCTTTGGTTGGACTTCTGATCTTCGGGCCTTATTTGCCAGAAATTTGAGGCAGCAAGGGTCGACATCTTTAAGAACGGTGCCCTTTGTTCTCATGGATGTTGGACGGCGTCCTCATGCTGATTATGCTGTTGTTAACTTGGAAGGCTCAAGACATCCCTTACCTCTTACTACAGTTTATCATAAATTGCAACCCATAAATGCTACTCCTTACACATTCTTGCAAGCACTTTTTGGACATGAATATCCAGTTGGTTTACTGGATGAAGAGAAAATTCTTCCTTTGGGAAAGGATATCAATGCTGTTGGCATATGCTATTTTAGAAATGGGATTGCTGAAATTAAGTCATGCAAAGAGTTGCCGTATTTTCTGTCTGAATTGAACAAAGATCAGATGATCGGGGAGCTTACATTTAAAACAAAGGTACTCTTTTGGAGCGGTATCATCCTCAGTTCACTGTCAGTTGGGATTCTTGGTTATGCTTTTATGAGAAACTGGAACAAGTGGAAACAATGGAGGCAACAGAGGCAGTATCAGCAGGAAAGGCAAGTCAACTATGATGATGCTGAAGTTGAGATTTTAGACAATGAGATTGAAGATGTTCCAGATGGACAATTATGTGTTATATGCCTGATGAGGAGAAGGCGTTCTGTGTTTATTCCCTGTGGGCATCTTGTGTGTTGCCAAGGGTGTGCCATATCAGTTGAACGTGAAGTGGCACCCAAGTGTCCTGTCTGTCGGCAGGAAATTCGCAATTCAGTTCGGATATTCGAATCTTGA 1161 0.441 MSSHEQALVSLFSQLALSFDGAVLGLALAYAAVRSVLKLTSNSAALDKLRDAPSVSVSDLRSLLESSDDNGDSCDKLVVVRGTVEAKSAVENGWKSLRPSVLVSRESGDGAVAIQRTQTCIYTEWKGFFGWTSDLRALFARNLRQQGSTSLRTVPFVLMDVGRRPHADYAVVNLEGSRHPLPLTTVYHKLQPINATPYTFLQALFGHEYPVGLLDEEKILPLGKDINAVGICYFRNGIAEIKSCKELPYFLSELNKDQMIGELTFKTKVLFWSGIILSSLSVGILGYAFMRNWNKWKQWRQQRQYQQERQVNYDDAEVEILDNEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRNSVRIFES 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1466 386 FunFam Baculoviral IAP repeat containing 7 343 384 - -
Mibi11g1466 386 Pfam Zinc finger, C3HC4 type (RING finger) 332 379 - -
Mibi11g1466 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 386 IPR013083 -
Mibi11g1466 386 ProSiteProfiles Zinc finger RING-type profile. 334 374 IPR001841 -
Mibi11g1466 386 SUPERFAMILY RING/U-box 333 380 - -
Mibi11g1466 386 SMART ring_2 334 373 IPR001841 -
Mibi11g1466 386 Pfam E3 Ubiquitin ligase 139 284 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mibi11g1466 386 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 386 IPR044247 GO:0004842
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1466 331 383 C3H Transcription Factor Family AT3G06140 39.623 3.03e-06 47.0