Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1463 ATGATGAATACTACTGCTCCTGCAAGAAATAGGCCTCCTTTCACAGCTTCTCAGTGGCAAGAACTTGAACAGCAAGCTCTTGTTTTCAAATACATGGTCTCAGGCACACCTATCCCTCCTGATCTCATATTCTCCATCAAAAGAAGCCTCGACTCTTCAATATCTTCAAGGCTTTTCACTCACCATCCTGGTGTGGGATGGGGGTGTTTTGAAATGGGTTTTGGGAGGAAAATTGACCCAGAACCTGGAAGATGCAGAAGAACAGATGGGAAGAAATGGAGATGCTCAAAGGAAGCATATCCTGATTCAAAATACTGTGAAAAACATATGCACAGAGGAAGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAAGCAGCATTATCACAAACACTTCACAAGCAATCCCATCATCATATAGCTTTAATAGAGGTCTTTCCATGATGAGCAGCAACCCAAATAATACCAACAACACATCATCCTCAATCTCTTCTTCTTCTTTCCCTTTCTCTTCTGAGTCATCATCTCAATATCCTTCTTACCAGAATTCTTCTCTCAATCCCTACTTTTACACCCACTCATCAACCTCTTCTAGGCCTCCTGATTCTGATTTCTCATCTCATACCAACAGTACTACTCATCAGCTATTTTTGGACTCTGGTTCTTATTCTCAGGATGAGAAAGACTATAGAAATATTCATGTGGATGAAAGGGCATTTTTCCCAGAAGCTTCAGGGTCAGCTAGAAACTTCCCTGCTGACTCATACCACCACCAATTATCTATGAGCTCTTTCAATAAATCCTATTCAAACTCTCACCAGTTTCAAAGCCTCAATGATAGTGACAGTAATCCAAGGCATCGACAAGAAGAACAAGAGCAACATTGTTTTGTTCTAGGCACTGACTTCAAATCACCTAGACCAAGCAAAACTGAGAAAGAGACTAATAGTACTGAAACCACCCAGAAACCACTTCACCACTTCTTTGGGGATCAGTGGACTCAGAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCCAGAATCCACACAGGTGATCATGATCATTATTACTCTGATAGTTCTTTAAACCTGGATACAGCCAAGAAAGAGATTGACATAAAGATGAAAAGGTTTCGTGGCTAG 1155 0.4113 MMNTTAPARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLIFSIKRSLDSSISSRLFTHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTSSIITNTSQAIPSSYSFNRGLSMMSSNPNNTNNTSSSISSSSFPFSSESSSQYPSYQNSSLNPYFYTHSSTSSRPPDSDFSSHTNSTTHQLFLDSGSYSQDEKDYRNIHVDERAFFPEASGSARNFPADSYHHQLSMSSFNKSYSNSHQFQSLNDSDSNPRHRQEEQEQHCFVLGTDFKSPRPSKTEKETNSTETTQKPLHHFFGDQWTQKNTDSWLDLASNSRIHTGDHDHYYSDSSLNLDTAKKEIDIKMKRFRG 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1463 384 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi11g1463 384 MobiDBLite consensus disorder prediction 273 322 - -
Mibi11g1463 384 MobiDBLite consensus disorder prediction 308 322 - -
Mibi11g1463 384 Pfam WRC 80 122 IPR014977 -
Mibi11g1463 384 PANTHER GROWTH-REGULATING FACTOR 5 12 345 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi11g1463 384 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi11g1463 384 MobiDBLite consensus disorder prediction 149 171 - -
Mibi11g1463 384 MobiDBLite consensus disorder prediction 285 299 - -
Mibi11g1463 384 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Mibi11g1463 384 MobiDBLite consensus disorder prediction 194 213 - -
Mibi11g1463 384 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi11g1463 384 MobiDBLite consensus disorder prediction 106 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1463 Mibi-ChrMibi11 34256453 34258052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1463 11 337 GRF Transcription Factor Family AT3G13960 40.483 3.32e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi11g1463 WRC 2.7e-21 No_clan