LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi11g1453	ATGAGTTTGCAACAAGCTGGGCAGTTTAGATCCTCTAACGGGCATGGCCGTCGAAAGTCTGAAAGAGAAGGGGCAGCCAAGTCAGAGAATAAGATCTCATCTGGAAAGGCAAATGCCAACGGACTGGCAAGTACAGGAATTATTTTAAAGATGGCTCGCTTGACAAAGGATGGTTCTTTGCGAGGGATGAAGCCTGGTATAGAATCAATCAGCAAGGCTCCTTCAAAGACTTTAATTATACCTGGCAAAGAATTTGTACAAGTCATAGCAAAGGGTGTTGCTGTCACTAGGGATGGCCTGTTTAATGAAGCTCACCATGAAATGTATCAGGACATCATTGTTGATTCAGTAATATCACAATCACACCATGTCGATTTGGAGAGAGAACTACAACCATGGGTGCCTGATGAAGATGATCCAAAATGCCCTGAACTAGATAATATCTTTGATGAAACTTGGAATAGGGGCTGGGATCAGTTTGAAACAAACAAAACATTGTTTGGTGTAAAAAGCACGTTCAATGAGGAACTTTATACCACAAAGCTTGAAAAAGGCCCTCGAACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCCAGAGAAATCGAGGGTGAGGATACCCAAGATCTTCACTTGGCAGAGGAAAGAGGCCTTTATCTACAGAAGAATTTTGATATCGATGAAGAGACTAGATTCTCGTCAGTCTATAGGGATAAAGGGGTTGACGACAGTGGCTATGATGAGAATGAGGATATTCTGTTGGATTCACACAATTCTGAAACCTTTGGAGATACATTTGCTTCAGTTGTTAAGAGGTCTGGGGAACCAAGTGATGTAAAAGATGATGATGGGGTTAGAGCATCATTAAAGTCATCCTCTAAGGATTTACCACAATCTTCTCAGTTATGTAATGGTGTGGATTTAGGACGTGCCGGTTCTCACAATCTTGCTTATCAGTTAGCATCTGAACTCCCTGCAAAAAGTGACCCTATTTCAGATGCTGAATGCAGGGTACATGGGAACTCACTTAGTGATCAGCATGGAACTATTGACAGTAGCAAGGAAGAAAACCAGAGTATGCAGGAGACTGCTGATGTTCAACCATTGAAATCCAAGGACGTACAGTCATCACATAACTTGAAGAAAGATGAACCTGATACCGGGGCATTGTCTTCAAATGCTGCCATTCATGCCTCTTCATCTCATATTTCATCAAAGACTCCTGAAAAGACAGATTGTGTGAAAGGTGCTGCAGCATCCTCTGGTCCTGGCTTATCACCAAGTTCTTCAGTTGGTTCATTATCTTCTGAAAAATCAACACTGAATCCAAATGCAAAGGAATTCAAGCTCAATCCAAATGCAAAGAGTTTTGTTCCATCCCAATCATCAGCTAGGCCTCCCTCACAGGTGTCAGATGGTTCCTTCTATTACCCAACTAATGTAACTACTGTACCGCATATGCCTGCCATGCCCATGGAACTTGGAATGGGACATGCATTTGCTGGGCCACAACCTGTCCTGTATAATCCACAAGTAGCACAAATGTCATCACAAGCTTATTTCCATCCTAATGGACCACAGTACGGACAGCTTCTTGGTCATCCTAGGCAAGTTGTGTACGTGCCAGGTTATTTACCTGAAACAACACCGACTGGGGAGTCTTCAGCTTATAGGAAGATATTCTTATGA	1689	0.4245	MSLQQAGQFRSSNGHGRRKSEREGAAKSENKISSGKANANGLASTGIILKMARLTKDGSLRGMKPGIESISKAPSKTLIIPGKEFVQVIAKGVAVTRDGLFNEAHHEMYQDIIVDSVISQSHHVDLERELQPWVPDEDDPKCPELDNIFDETWNRGWDQFETNKTLFGVKSTFNEELYTTKLEKGPRTRELEKQALRIAREIEGEDTQDLHLAEERGLYLQKNFDIDEETRFSSVYRDKGVDDSGYDENEDILLDSHNSETFGDTFASVVKRSGEPSDVKDDDGVRASLKSSSKDLPQSSQLCNGVDLGRAGSHNLAYQLASELPAKSDPISDAECRVHGNSLSDQHGTIDSSKEENQSMQETADVQPLKSKDVQSSHNLKKDEPDTGALSSNAAIHASSSHISSKTPEKTDCVKGAAASSGPGLSPSSSVGSLSSEKSTLNPNAKEFKLNPNAKSFVPSQSSARPPSQVSDGSFYYPTNVTTVPHMPAMPMELGMGHAFAGPQPVLYNPQVAQMSSQAYFHPNGPQYGQLLGHPRQVVYVPGYLPETTPTGESSAYRKIFL	562

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	392	407	-	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	14	29	-	-
	Mibi11g1453	562	Pfam	Ataxin-2 C-terminal region	437	448	IPR009818	-
	Mibi11g1453	562	Pfam	LsmAD domain	167	237	IPR009604	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	274	289	-	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	331	472	-	-
	Mibi11g1453	562	PANTHER	ATAXIN 2-RELATED	44	544	IPR045117	GO:0003723
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	273	302	-	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	1	37	-	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	422	472	-	-
	Mibi11g1453	562	MobiDBLite	consensus disorder prediction	342	374	-	-
	Mibi11g1453	562	SMART	LsmAD_2	167	238	IPR009604	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi11g1453	Mibi-ChrMibi11	34112815	34118967	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi11g1453	11	34112815	34118967	Mibi04g0420	04	7344986	7348276	CCT
	Mibi11g1453	11	34112815	34118967	Mibi11g1453	11	34112815	34118967	ECH