Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1451 ATGCTGTCAAAATGTCACCAGATTCATCAGGCTCAACTCATGGGATTAACTTCTGTTCGAGTTCCTCTTCCTTTTGATCTGACAGAAGAACCAATATATGTGAATGCGAAGCAGTACCATGCTATTCTGAGGCGTAGACAGTATCGCGCCAAACTCGAAGCACAGAACAGACTCATCAAAGCTCGAAAACCATATCTTCACGAGTCCCGGCATCTGCATGCATTAAGGAGGGCTAGAGGCACTGGTGGTCGCTTTCTCAACAGCAAACAACTCCAGGAATCAAACCTCAAAGCAGACAGCCGTGGCAGCCTGAAAGCTCCAGAAAGTACTAGGTTGCACCTTGGTCATGGAAAGATGTCAGAATCCAAAAATCATGGTGATGTAGAAAACTATAAAGATGGGGCATGCCCAACAGGTTCTGATATCACAAGTGCATCCAATAGTGATGGCATGTTTCCGCAACATGAGTCCTGCTTCAGGCTCTCTAGTTACCCTCCTCACATTGGATGGAACATGCAAGTCGGCTACTCAGCTGATCCCGGCACTCGTGGTGGTGGGAATCAACAGCACGTGTCTGTTCTCATGTGA 588 0.4728 MLSKCHQIHQAQLMGLTSVRVPLPFDLTEEPIYVNAKQYHAILRRRQYRAKLEAQNRLIKARKPYLHESRHLHALRRARGTGGRFLNSKQLQESNLKADSRGSLKAPESTRLHLGHGKMSESKNHGDVENYKDGACPTGSDITSASNSDGMFPQHESCFRLSSYPPHIGWNMQVGYSADPGTRGGGNQQHVSVLM 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1451 195 MobiDBLite consensus disorder prediction 111 130 - -
Mibi11g1451 195 MobiDBLite consensus disorder prediction 80 131 - -
Mibi11g1451 195 Gene3D - 28 89 - -
Mibi11g1451 195 ProSitePatterns NF-YA/HAP2 subunit signature. 33 53 IPR018362 GO:0003677|GO:0016602
Mibi11g1451 195 PRINTS CCAAT-binding transcription factor subunit B signature 62 85 IPR001289 GO:0003700|GO:0006355
Mibi11g1451 195 PRINTS CCAAT-binding transcription factor subunit B signature 31 53 IPR001289 GO:0003700|GO:0006355
Mibi11g1451 195 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 9 139 IPR001289 GO:0003700|GO:0006355
Mibi11g1451 195 SMART cbf3 27 88 IPR001289 GO:0003700|GO:0006355
Mibi11g1451 195 MobiDBLite consensus disorder prediction 85 99 - -
Mibi11g1451 195 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 30 85 IPR001289 GO:0003700|GO:0006355
Mibi11g1451 195 ProSiteProfiles NF-YA/HAP2 family profile. 28 88 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1451 Mibi-ChrMibi11 34105869 34106764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1451 10 193 CCAAT-HAP2 Transcription Factor Family AT1G17590 51.064 1.17e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi11g1451 CBFB_NFYA 1.4e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1451 11 34105869 34106764 Mibi11g1451 11 34105869 34106764 ECH