Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1441 ATGTGTATGGACATCTTATTATGGAGGAAGTTCTTTATGGCAGGTTTGGCTCCAGAAGGAACACAATTTGATGCTCGTCAATATGATGCTAAAATGAATGAATTGCTTTCTGCAGATGGACAAGATTTTTTTACCTCCTATGATGAGGTCTATGACACCTTTGATGCGATGGGATTACAAGAAAATCTGTTGAGAGGCATCTATGCATATGGTTTTGAGAGGCCTTCTGCAATCCAACAGAGGGGAATTGTTCCTTTTTGCAAGGGTCTTGATGTCATTCAACAGGCCCAGTCTGGAACTGGCAAGACAGCAACATTCTGCTCAGGAATTTTGCAGCAACTTGACTATGGTTTAGTTCAGTGCCAGGCTTTGGTATTGGCACCAACAAGGGAGCTGGCACAGCAGATTGAGAAGGTTATGCGAGCTCTTGGTGATTACCTTGGTGTTAAGGTTCATGCTTGTGTAGGTGGCACAAGTGTTCGTGATGATCAGCGCATTCTCCAAGCTGGTGTTCATGTTGTTGTTGGAACTCCTGGTCGTGTGTTTGACATGCTGCGCAGGCAGTCTCTTCGTCCAGATTACATAAAGATGTTTGTTCTGGATGAGGCTGATGAAATGCTTTCTCGAGGTTTCAAGGACCAGATCTATGACATCTTCCAGCTGCTGCCAGGCAAAATTCAGGTTGGAGTCTTCTCTGCTACAATGCCTCCTGAGGCTCTCGATATTACCAGGAAGTTCATGAATAAGCCTGTGAGAATCTTGGTAAAGCGTGATGAACTGACCCTGGAAGGTATTAAGCAATTTTATGTCAATGTTGATAAGGAGGAGTGGAAGCTAGAGACACTATGCGACCTATATGAAACACTAGCAATTACCCAGAGTGTCATTTTTGTCAACACAAGGCGCAAGGTGGACTGGCTTACTGATAAGATGCGAAGCAATGACCATACAGTATCAGCAACCCATGGTGACATGGACCAAAACACTCGGGATATTATTATGCGTGAATTCCGATCTGGTTCTTCTAGAGTTCTGATCACTACTGATCTCTTGGCTCGTGGTATTGATGTGCAGCAAGTCTCCCTTGTCATCAACTATGACCTGCCAACCCAACCTGAAAATTATCTTCATAGAATTGGTCGAAGTGGACGATTCGGAAGGAAGGGTGTGGCTATAAATTTTGTGGTGACGGATGATGCTAGAATGCTGTCTGACATTCAGAAGTTCTACAACGTATCCATAGAGGAGTTGCCATCAAATGTTGCAGATCTGCTCTGA 1278 0.4413 MCMDILLWRKFFMAGLAPEGTQFDARQYDAKMNELLSADGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRDDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVVTDDARMLSDIQKFYNVSIEELPSNVADLL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1441 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 406 IPR027417 -
Mibi11g1441 425 Pfam DEAD/DEAH box helicase 77 238 IPR011545 GO:0003676|GO:0005524
Mibi11g1441 425 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 50 409 - -
Mibi11g1441 425 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 52 80 IPR014014 GO:0003724
Mibi11g1441 425 FunFam Eukaryotic initiation factor 4A-II 40 259 - -
Mibi11g1441 425 SMART ultradead3 71 268 IPR014001 -
Mibi11g1441 425 Gene3D - 42 260 IPR027417 -
Mibi11g1441 425 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 264 425 IPR001650 -
Mibi11g1441 425 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 83 253 IPR014001 -
Mibi11g1441 425 SMART helicmild6 305 386 IPR001650 -
Mibi11g1441 425 CDD SF2_C_DEAD 265 395 - -
Mibi11g1441 425 FunFam Eukaryotic initiation factor 4A-III 260 425 - -
Mibi11g1441 425 Pfam Helicase conserved C-terminal domain 278 386 IPR001650 -
Mibi11g1441 425 CDD DEADc_EIF4A 56 254 - -
Mibi11g1441 425 Gene3D - 261 425 IPR027417 -
Mibi11g1441 425 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 199 207 IPR000629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1441 Mibi-ChrMibi11 34005681 34008013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1441 13 425 Eukaryotic Initiation Factors Gene Family AT1G72730 87.923 0.0 762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1441 11 34005681 34008013 Mibi04g0455 04 8546690 8547354 CCT