Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1439 ATGGCTCGTGGGGGGATTAGGGAAAGGATGCGGAGGAGCAACCTTTACACATTTACTTGCCTTCGACCCAGAACGACCGAGGATGGGGCCTATTCCCTTCAAGGACCGGGGTTCTCACGAACTGTTCATTGCAACCAACCTCATTTCCATGAAAAGAAACCTCTACATTACTGCAAGAATTACATATCAACTACAAGATATAATGTTATCTCATTTTTTCCCAAGGCTCTCTTTGAGCAATTTCGACGAGTTGCTAATATATATTTTCTCTTGGCTGCATGCCTCTCAGTCTCTCCAATTTCACCTTTCACACCAGTGAGCATGATTGCTCCTTTGGCATTTGTTGTCGGGCTTAGTATGGCAAAGGAGGCGCTGGAAGATTGGCGGAGGTTTCTTCAGGATGTCAAAGTTAACCGTCGGAAGGTTAGTGTCCATAATGGCGATGGTGTATTTGATTTGAATGCATGGCACAAGATAAGGGTTGGAGATGTGGTAAAAGTAGAAAAGGATCAGTTTTTCCCCGCTGACTTGCTTCTGTTGTCATCAAGTTATGATGATGGTATATGCTATGTGGAAACTATGAATTTAGATGGTGAAACAAACTTGAAAGTGAAGAGATCTTTGGAGGTTACCTTGCCCCTTGATAATGATGGCGCTTTTAAGGATTTCACAGGAACAATACAATGTGAAGACCCAAATCCCAATCTTTACACATTTGTTGGTAACATTGAGTATGAACGTCAGGTTTATCCCATTGATCCTATGCAAATTCTCCTCCGCGATTCAAAGCTGAGAAATACTGATTATGTCTATGGGGTGGTCATTTTCACGGGTCATGACAGCAAAGTGATGCAGAATTCCACAAAGTCGCCTTCAAAAAGGAGCAGAATAGAAAAGAAGATGGATTATATCATTTATCTTCTTTTCACGGTCCTTATTTTAATATCTGTGATAAGTTCCGTTGGATTTGCTATAAAAACCAAGTTTCAAACTCCAGACTGGTGGTACTTACGGCCCAAGGAAGCTGAGTACCAATACAATCCCAACAATCCTATCTTGGCCGGGATGAGCCATCTTATTACTGCGCTCATTCTTTATGGATATTTGATACCCATATCACTCTATGTGTCAATTGAGGTTGTGAAGGTCCTGCAAGCAAGATTCATCGACAAGGACCTGCAGATGTTTGATGAAGAAACAGGGACTCCAGCTGATGCACGGACATCAAATTTAAATGAAGAGCTGGGTCAGGTAGACACTATCCTTTCTGACAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAATGCTCCATTGCTGGTACAGCATATGGAGTGCGCTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGACTTTGAGGAGCAGGAGTCAGATCTCTCTAATTTTCCCATGCCTAAGAATAAAGCCCGTGGTTTGAGTGAAAATAATGATATAGGCGGAGAAATTGAAATGGAGCCCGTTGTAACTCCTACGAGTAATGAAAATAAAAAGCTTGCCATAAAGGGATTTAATTTTGAGGACAACCGGATCATGAACTGCAACTGGTTGAAAGAGGCCAATTCCGATGTTCATTTGTTGTTTTTCCGGATATTGGCAGTTTGCCATACTGCCATTCCTGAGTTGAATGAGGAGACTGGCAGTATTACATATGAAGCTGAGTCACCTGATGAGGGAGCTTTTCTTGTAGCAGCCAGAGAATTTGGTTTTGAGTTTTGTAAAAGGAATCAGTCGAGTACATTCATCCGTGAAAGACTGTCTCCTTCTGGAGAACCAGTTGAAAGGGAGTACAAAATCCTGAATTTGTTGGACTTCACTAGTAAAAGAAAACGGATGTCTGTGGTTGTACGTGATGAAGACGGCAACATTCTTCTTATGTGCAAGGGGGCAGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAAACATTTTTGGAGGCTACTACGAGGCATTTAAATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAGCTTGATGAGCAAGAGTACTTTGCTTGGAATAATGAATTCCAGAAAGCCAAAGCAGCTGTTGGATCTGACCGAGAGGAGACACTTGAACGATTATCAGATGTAATGGAGAGAGAGTTGATTCTTGTTGGAGCTACTGCTGTTGAAGATAAACTGCAGAAAGGGGTGCCCCAATGCATTGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACTGGAGACAAGATGGAAACTGCAATCAATATTGGGTTTGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATATGTATTACCACTATGAACTCAGTATCATTAACCAACAGTGGAAAAGAGGCCATCAAGGAGAGCATTATGAACCAAATCACCAATGCCTCACAAATGATCAAGCTGGAGAAAGATCCTCATTCTGCATTTGCATTAATCATTGATGGTAAAACTCTGACATATACACTGGAAGATGATATGAAGAGCCAGTTTTTGGGATTGGCAGTAGAATGTGCATCTGTCATCTGCTGTCGCGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTGGTGAAGGAAGGAACTGGAAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCGGATATTGGTGTTGGTATTAGTGGAGTTGAGGGTATGCAGGCAGTGATGGCCAGTGACTTTGCCATTGCCCAATTTCGGTTCTTGGAGCGTCTTCTGGTAGTCCATGGACATTGGTGTTATAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCATTTGGCTTGACCATATTCTATTTTGAGGCCTTTACGGGTTTCTCTGGGCAATCAGTTTATGATGACTGGTACATGTTACTGTTCAACGTTGTTCTTACATCATTACCTGTCATCTCACTTGGTGTTTTTGAACAAGATGTTTCATCAGAAGTCTGCTTGCAGTTCCCTGCACTTTACCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTACAGAATATTGGGATGGATGGGCAATGGTCTCTATTCTTCCCTTATCATCTTCTTCCTTAATGTCATCATCTTCTACAATCAAGCATTCCGTGCCAATGGCCAGACCGCTGACATGGCTGCTGTTGGCACAACAATGTTCACTTGCATCATTTGGGCTGTAAATCTTCAGATTGCCCTGACAATGAACCATTTCACCTGGATTCAACACCTATTGGTCTGGGGCAGTGTAACTTCATGGTACTTATTTCTCCTGCTATATGGCATGATTTCTCCATACTATTCTAAGAATGCCTACCAAATATTAGTTGAAGCTCTTGGTCCTGCACCTCTTTATTGGATAGCAACCATTTTAGTAACAGTCACATGCAATCTTCCTTATCTCACCCACGTATCCTTCCAAAGATGTTTTAACCCCATGGATCATCACATCATCCAAGAAATTAAGTATTATAAGAAGGACATTGAAGATCGAAACATGTGGACTAGGGAAAGTTCTAAGGCCAGACAGGAGACACAGATTGGTTTCACAGCTAGAGTTGAAGCCAAGATCAGGCAGTTAAGAGGAAGGCTGCAGAAGAAGCAATCATCTATAGGTGCTTTATCACCACCAAGAAACTTATAG 3684 0.4188 MARGGIRERMRRSNLYTFTCLRPRTTEDGAYSLQGPGFSRTVHCNQPHFHEKKPLHYCKNYISTTRYNVISFFPKALFEQFRRVANIYFLLAACLSVSPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNRRKVSVHNGDGVFDLNAWHKIRVGDVVKVEKDQFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLEVTLPLDNDGAFKDFTGTIQCEDPNPNLYTFVGNIEYERQVYPIDPMQILLRDSKLRNTDYVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYLLFTVLILISVISSVGFAIKTKFQTPDWWYLRPKEAEYQYNPNNPILAGMSHLITALILYGYLIPISLYVSIEVVKVLQARFIDKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDFEEQESDLSNFPMPKNKARGLSENNDIGGEIEMEPVVTPTSNENKKLAIKGFNFEDNRIMNCNWLKEANSDVHLLFFRILAVCHTAIPELNEETGSITYEAESPDEGAFLVAAREFGFEFCKRNQSSTFIRERLSPSGEPVEREYKILNLLDFTSKRKRMSVVVRDEDGNILLMCKGADSIIFDRLSKNGKTFLEATTRHLNEYGESGLRTLALAYRKLDEQEYFAWNNEFQKAKAAVGSDREETLERLSDVMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTMNSVSLTNSGKEAIKESIMNQITNASQMIKLEKDPHSAFALIIDGKTLTYTLEDDMKSQFLGLAVECASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMLLFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYNQAFRANGQTADMAAVGTTMFTCIIWAVNLQIALTMNHFTWIQHLLVWGSVTSWYLFLLLYGMISPYYSKNAYQILVEALGPAPLYWIATILVTVTCNLPYLTHVSFQRCFNPMDHHIIQEIKYYKKDIEDRNMWTRESSKARQETQIGFTARVEAKIRQLRGRLQKKQSSIGALSPPRNL 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1439 1227 FunFam Phospholipid-transporting ATPase 118 288 - -
Mibi11g1439 1227 Gene3D - 583 722 IPR023299 GO:0000166
Mibi11g1439 1227 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Mibi11g1439 1227 FunFam Phospholipid-transporting ATPase 591 722 - -
Mibi11g1439 1227 SFLD p-type atpase 405 932 IPR044492 -
Mibi11g1439 1227 Coils Coil 448 468 - -
Mibi11g1439 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Mibi11g1439 1227 Gene3D - 432 457 IPR023299 GO:0000166
Mibi11g1439 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1180 - -
Mibi11g1439 1227 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Mibi11g1439 1227 Gene3D - 723 921 IPR023214 -
Mibi11g1439 1227 FunFam Phospholipid-transporting ATPase 724 921 - -
Mibi11g1439 1227 Pfam Cation transport ATPase (P-type) 546 651 - -
Mibi11g1439 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Mibi11g1439 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Mibi11g1439 1227 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Mibi11g1439 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi11g1439 1227 Gene3D - 117 288 - -
Mibi11g1439 1227 Gene3D - 419 431 IPR023214 -
Mibi11g1439 1227 SFLD Haloacid Dehalogenase 405 932 - -
Mibi11g1439 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1150 IPR023298 -
Mibi11g1439 1227 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Mibi11g1439 1227 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Mibi11g1439 1227 SUPERFAMILY HAD-like 410 925 IPR036412 -
Mibi11g1439 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1439 Mibi-ChrMibi11 33992572 33998657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1439 1 1222 Primary Pumps ATPases AT1G17500 75.797 0.0 1952