Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1428 ATGGAGTGCAAGGACAGATATCAACAGATTGTGATTCCTGTTTTCTACAACATAGATCCATCAGATGTGAGGCATCAAAAGGGGTCTTATGCAGATGCTTTAGCTCAGCATGACTCAAATTACAAGGAAGAGATGCCAAATTGGAAATATGCTTTGAATAAAGCTGCTAATTTATCTGGATTTCATTCATCAAAGTATGGGGATGAAGCTAAGCTTATTGAAGAAATTGCCAAATCTGTGTCAAACAAGTTGAGTAATGTGTATCAAAGTGACTTCACAGACCTTGTTGGAATTGATGAAAGAATTGCAGATTTAGAATCACTAATGGGTCAAGGATCAGAAGATGTCCGTATTGTTCGAGAAGAATCAATAAAAGATCCTGGAAAACGCAGCCGTTTATGGGATCCTGATGATAGTTATGAGGTGTTGAAAAATAATATGGGGACTGAAGCCATTCAAAGCATAAGTCTGGACATGTCAACAACTGGAGCTTTGTCCTTAAATCCTCAAGTCTTTGCTAGGATGCACAAGCTGAAGTTTCTTAAAATATTTACTCACATATCATCGTTGGATGCATGTGTGCATCTACCTCGAGGGCTTGAATTTTTGCCTAATGAACTCAGAATTCTTCTTTGGCAAAATTACCCTTTGAAATTCCTGCCTCCAACATTCTCTGCAGAAAATCTTGTTCAACTTGTCATGAACTACAGCAATGTGGAAAAACTTTGGGATGGAGTTGTGCCTCTTGTGAATTTAAAGAAATTTGACCTCGGGCATTCTTATAATCTGCTAGCTCTCCCAGATTTTTCTACAGCCAATAATCTTGAATCAGTATCACTCTTCAGTTGTAAGAACCTGCATCTTGTTCATCCATCTATTTTATCTCTTCAAAAGCTTGAGTCCTTGGATCTATCATACTGTGAAAAGCTTACCAGTCTTGTGAGTGATATCCCTTTGAAATCCCTCCGCTCGCTACAGCTAGCTTCCTGCTCTAGACTGAAGAAATTCTCAGTGACATCAGAGAACATGAGAAGGTTAGATTTATCAGAGACAGCTATTGAGGAATTGCCATTATCTTTAGGATGTCTCAGCCAACTTGAAACTTTATCCCTCTGGCGTTGTAAAAGTCTTAAGCTTCTTCCAAACAACTTAGTTGGCCTGAGATCTCTGCGACATCTTAAGGTAACTGGTTGTATGAAACTTCAATCCCTCCCAGAACTTCCACCATCCATTGAAATATTATGGGCCTCAGATTGCTCATCCTTGGCTAAATTACCGGTATATACTGATCCACTCAACACAAACATGAAAGAAATTCGTCTGGCAAATTGCATGCAGTTGGATGAAACTTTGCTTAATGATATTGGATGGAACATTCATCTCAAGCTGATGAATCATTATGAGTTTGAACGTGTATCAGAAGATCAGGAGAAGCAGATTGATGATGTTTATATTCGAACTGGAGGAATATACCCCGGAAGCAAAGTACCAAACTGGTTTAAGTTTAGGGCATCTCAGGCTTCAATAACTATTGCTCTCAACATTCCTGAGGCATTCATTTTCTGTGTCGTTCTTTCTCAGTTCCCATTAAGCAGTTTTCTAATCTCCATCACAGTTGACTGCTTCCTGGAAAACAATGATGGTGATCATAGGCTTCATGTTAAGTCTTTGGACATTGTATTACCTGGTACAGAACTTAATTCAGATCATGTGTGTGTGTTTTATGTAGAATGTTTGGGTTTTATAAGTGGAAGAATTGAAGAAAATAGAGAGAGTTATGAACACAAGGTTTCGTTCGAATTTTCGGCTCAATCAGAGGTTGAGCAAGAAGATGAGGATAAAGAGATTATGATAAAAGGGTGTGGAGTTTACCCACTATATGCCAGAGAAGTTGGATTTGGAATTCAAAGATGTGATACGTTAGGTCCATTTCCTCCATTGTTGGAAGCTAGTGAAGCCACTGATGATCTTGAAAGCTCTAACGAGAAGAAAGATGAGGAAGAGGCAGTTTCTTTAGCTCAAAAATCCAATGCAGATATATTTCCACCACTTCCAATTGAAACATGGAAGAAAGCAAGTCAAGGCTTGAAAGATCTTGTCAACCTTTGA 2109 0.3869 MECKDRYQQIVIPVFYNIDPSDVRHQKGSYADALAQHDSNYKEEMPNWKYALNKAANLSGFHSSKYGDEAKLIEEIAKSVSNKLSNVYQSDFTDLVGIDERIADLESLMGQGSEDVRIVREESIKDPGKRSRLWDPDDSYEVLKNNMGTEAIQSISLDMSTTGALSLNPQVFARMHKLKFLKIFTHISSLDACVHLPRGLEFLPNELRILLWQNYPLKFLPPTFSAENLVQLVMNYSNVEKLWDGVVPLVNLKKFDLGHSYNLLALPDFSTANNLESVSLFSCKNLHLVHPSILSLQKLESLDLSYCEKLTSLVSDIPLKSLRSLQLASCSRLKKFSVTSENMRRLDLSETAIEELPLSLGCLSQLETLSLWRCKSLKLLPNNLVGLRSLRHLKVTGCMKLQSLPELPPSIEILWASDCSSLAKLPVYTDPLNTNMKEIRLANCMQLDETLLNDIGWNIHLKLMNHYEFERVSEDQEKQIDDVYIRTGGIYPGSKVPNWFKFRASQASITIALNIPEAFIFCVVLSQFPLSSFLISITVDCFLENNDGDHRLHVKSLDIVLPGTELNSDHVCVFYVECLGFISGRIEENRESYEHKVSFEFSAQSEVEQEDEDKEIMIKGCGVYPLYAREVGFGIQRCDTLGPFPPLLEASEATDDLESSNEKKDEEEAVSLAQKSNADIFPPLPIETWKKASQGLKDLVNL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1428 702 FunFam Disease resistance protein RPS4 149 341 - -
Mibi11g1428 702 Gene3D - 1 90 IPR035897 -
Mibi11g1428 702 Gene3D Ribonuclease Inhibitor 139 315 IPR032675 -
Mibi11g1428 702 SUPERFAMILY L domain-like 129 462 - -
Mibi11g1428 702 MobiDBLite consensus disorder prediction 656 672 - -
Mibi11g1428 702 ProSiteProfiles TIR domain profile. 1 84 IPR000157 GO:0007165
Mibi11g1428 702 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 61 IPR035897 -
Mibi11g1428 702 Pfam TIR domain 1 98 IPR000157 GO:0007165
Mibi11g1428 702 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 119 IPR044974 GO:0006952
Mibi11g1428 702 Pfam C-JID domain 491 631 IPR045344 -
Mibi11g1428 702 MobiDBLite consensus disorder prediction 653 676 - -
Mibi11g1428 702 Coils Coil 650 670 - -
Mibi11g1428 702 Gene3D Ribonuclease Inhibitor 316 464 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1428 Mibi-ChrMibi11 33883095 33886546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1428 118 439 WRKY Transcription Factor Family AT4G12020 37.853 2.62e-51 191