Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1427 ATGGCGTATTCTTCTCAATTGTCTGGTATAAAGTATGATGTGTTTATCAGCTTCAGAGGCACAGACACACGCCATGGTTTTCTTAGTCATTTGAGGAAGGAATTGAGGCAGAAACAAATTGATGCCTATGTGGATGACAGACTTGAAAGTGGAGATCAAATATCACTTTCACTTGTTAGAGCCATCAAAGAATCGCTCATGTCATTGATCATATTTTCAGAGGATTATGCTTCTTCAAGGTGGTGCTTGGAAGAGCTTGTGCAGATTATAGAGTGTATGGAGAATCAGGAACAGATTGTAATTCCTGTTTTCTATAACACAGATCCCTCAGATGTGAGGCATCAAAAACGGTCTTATGGGGATGCTTTGGTCAAACACGAAAAATATTACAAGGATAAGGTGCCAATTTGGAAATCAGCTCTGAATAAAGCAGCTAATTTATCTGGGTTTCATTCATCAAATTATGAGGATGAGGCTGAGCTTATAGAAGTGGTTGCCAAGTGTTTGTCAACAAGGTTGAATATGATGTTCCAAAGTGACTTAACAGGTCTTGTTGGCATTAATGAAAGGATTGCAGATTTAGAATCACTAATGAACCAAGGCTCAGAAGATGTTAGAGTCATTGGGATTTGGGCCATGGGCGGTATGGGTAAGACAACTATTGCTGCTGCAGTATTTAATCGATTTTATTCTGAATATGAAGGATATTGTTTTTTGGCAAATGTAAGAGAAGAATCAGAGAATCATGGGATTGTGTATTTGAAGAATAAAATTCTTTCTATACTACTCAAGGAACATGATTTGCATATTGGTACACCAAATGGATTACCCCCTTATGTTAAGAGAAGGCTTCTTAGAAAAAGAGTTCTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTAGAAAATTTAGTGGGAGCACTTGATTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTTCTAGCTAGAGGGGTTGATAGAATATACGAGGTTAAACCACTGATGTTTGATGATTCTGTTAAATTTTTTATGTCAAATGCCTTTGAGAATAATTGTCTGGACATGGAATGGATTGAACTATCAAGGAAGGTGATTAGTTACACTAAAGGCGTTCCATTAGCTCTGAAAGTTTTGGGTTCATTTCTTTATGGCAAAAGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAAAAAAATGCCACATGCAAAAATTCAGGATGTGATGAGATTGAGTTATGAAAAACTAGACAGGGAAGAGAAGAATATTTTCTTGTATATTGCATGTTTCCTCAAAGGATATAAATCGCAGCAAATAGTAGTTTTACTAAATGCTTGTGGTTTTTCATCAATTATTGGGCTAAAAGTCCTTCAAGATAAAGCTCTTATCACTGAAATCACAGGATCAAACTCAGGAGCCTCAAGAATATTTATGCATGATCTGATACAGGAAATGGGTTGGGAAATTGTTCGTGAAGAGTCAATTCATGATCCTGGAAAACGCAGTCGGTTATGGGATGTTAATGATATATATCAAGTATTGGAACATAATCTGGGGACTAAAGCCATTCAGAGCATAACTTTGAATGTGGCCAAAATTGAAGAACTCTGCTTAACTCCTCAAGTATTTGCTGAGATGTCAGAGCTAAAATTTCTTAGCTTTTCCCAGAATGATGCTAATGAACAAATCCTACGCCTTCCCCATGGCCTTGAATCTTTGCCAAATGGACTAAGATTTCTTCATTGGGATTGCTGTCCTTTAAAATCCCTACCTTCTACATTCTGTCCAGAACGTCTCGTTGAACTTAACATGACTTGGAGCCGTGTGGAGAAACTTTGGGATGGAGTTCTACGTCTTGTGAATTTGAAGAAAATTGACCTCAGTAACTCCAAGCATCTATTGGAACTCCCAGATTTTCCTTAG 1944 0.3745 MAYSSQLSGIKYDVFISFRGTDTRHGFLSHLRKELRQKQIDAYVDDRLESGDQISLSLVRAIKESLMSLIIFSEDYASSRWCLEELVQIIECMENQEQIVIPVFYNTDPSDVRHQKRSYGDALVKHEKYYKDKVPIWKSALNKAANLSGFHSSNYEDEAELIEVVAKCLSTRLNMMFQSDLTGLVGINERIADLESLMNQGSEDVRVIGIWAMGGMGKTTIAAAVFNRFYSEYEGYCFLANVREESENHGIVYLKNKILSILLKEHDLHIGTPNGLPPYVKRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDKQVLARGVDRIYEVKPLMFDDSVKFFMSNAFENNCLDMEWIELSRKVISYTKGVPLALKVLGSFLYGKSKEEWESQLEKLKKMPHAKIQDVMRLSYEKLDREEKNIFLYIACFLKGYKSQQIVVLLNACGFSSIIGLKVLQDKALITEITGSNSGASRIFMHDLIQEMGWEIVREESIHDPGKRSRLWDVNDIYQVLEHNLGTKAIQSITLNVAKIEELCLTPQVFAEMSELKFLSFSQNDANEQILRLPHGLESLPNGLRFLHWDCCPLKSLPSTFCPERLVELNMTWSRVEKLWDGVLRLVNLKKIDLSNSKHLLELPDFP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1427 647 Gene3D - 177 334 IPR027417 -
Mibi11g1427 647 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Mibi11g1427 647 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 646 IPR044974 GO:0006952
Mibi11g1427 647 SUPERFAMILY L domain-like 485 641 - -
Mibi11g1427 647 Pfam NB-ARC domain 195 422 IPR002182 GO:0043531
Mibi11g1427 647 Pfam TIR domain 11 186 IPR000157 GO:0007165
Mibi11g1427 647 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Mibi11g1427 647 Gene3D - 341 424 IPR042197 -
Mibi11g1427 647 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Mibi11g1427 647 Gene3D - 8 176 IPR035897 -
Mibi11g1427 647 Gene3D Ribonuclease Inhibitor 512 646 IPR032675 -
Mibi11g1427 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 434 IPR027417 -
Mibi11g1427 647 SMART till_3 11 147 IPR000157 GO:0007165
Mibi11g1427 647 SUPERFAMILY "Winged helix" DNA-binding domain 411 522 IPR036390 -
Mibi11g1427 647 PRINTS Disease resistance protein signature 283 297 - -
Mibi11g1427 647 PRINTS Disease resistance protein signature 375 389 - -
Mibi11g1427 647 PRINTS Disease resistance protein signature 624 640 - -
Mibi11g1427 647 PRINTS Disease resistance protein signature 207 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1427 Mibi-ChrMibi11 33869248 33871594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1427 12 644 WRKY Transcription Factor Family AT4G12020 32.248 4.32e-89 302