Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1354 ATGCTGATGATGAGCAAAGAACAAGAGAAGAGAGGGAAGCAGGAAAAAGGCTCTGATGCTGCTGAGAAGGTTATTGTTGCTGTTAAGGCTTCAAAGGAAATTCCAAAGACAGCACTGCTCTGGTCTTTGACTCATGTTGTTCAACCTGGGGACTGCATCACACTACTAGTAGTTGTTCCTTCACAAAGTTCAGGTAGAAGATTATGGGTTTTTCCTAGATTTGCTGGTGACTGTGCTAGTGGCCACAAGAAGTCTGCTTCAGGAACAACCTCTGAGCAGAAGTGTGAGATTATCACAGATTCTTGCTCCCAGATGATCCTTCAGCTTCATGACGTGTATGACCCAAATAAGATAAATGTCAAGATTAAGATTGTTTCTGGATCGCCTTGTGGAGCAGTGGCTGCAGAGGCCAAGAAAGCCCATGTCAGTTGGGTCGTATTAGACAAACATCTCAAAAATGAAGAAAAACGGTGCATGGAAGAGCTACAATGCAACATTGTGATTATGAAGCATTCCCAAGCAAAAGTACTCCGCTTGAACTTGGTTGGCTCAAGAAAAAAGGATCCTGAAGTAGCAGGCCAAGTACCTTCTGGGAAAGATGAGATGCATGGAAAGCAAACCAAAAAGAAGAATGATTGTTTGAATTCCATCAAAGTACCAGTTGTCACTCCAATTAGCAGCCCAGAGTTGGGGACACCATTCACAACAACTGAAGCAGGTACTTCATCAGTTTCAAGCTCAGATTTAGGAACATCACCATATTTCATCCCAGAGACAAATGGTGATTTGAAGAAAAAGGACACAATCAAGGAAAATCAAGAACTTGATTATGCCAATTCAGACACAGAGAGTGAAAATCTGTCCACATCCTCAGCAAGTCTGAGATTCCAGCCATGGATCACAGAATTACTTAGACATCAACAATCAACTCAGCGCATAGAAGAGAGACCAGAGAGACCATATGATAATAAGCCTCACTCCTCTACAACCAGAGCTTTGCTGGAGAAGTTCTCAAAGCTTGATAGAGAAGCTGGAATTGATATCTCAACAAGATGGACAACTGAGTTGGATTTCAGTGGAAATATGAGAGAAACAATGGCATTAACCAGAAATGCCCCTCCTGGACCTCCTCCATTATGTTCAATATGTCAACATAAGGCACCTGTTTTTGGAAAGCCTCCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCAACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTACATAGAGGGATTCTTCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCAAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTTGAAGTCCTAAGCTGTGCTCAGCATCGAAATGTTGTGATGCTAATTGGGTTCTGTATAGAGGACAAGAGAAGGCTGCTGGTTTATGAGTATATATGCAATGGATCATTGGATTCTCATTTATATGGGCGACAGCAAAAGCCATTAGAATGGTCAGCTAGACAGAAAATTGCAGTTGGAGCTGCCAGAGGGTTGCGATATCTCCATGAAGAGTGTAGAGTTGGCTGCATCATCCACCGTGATATGCGGCCAAACAACATCCTTATTACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACTGGTGTGGAGACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGACAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTGGTATTAGCAGAACTTGTTACAGGAAGAAAAGCTGTTGATCTCACTCGACCCAAGGGGCAGCAGTGTCTCACTGAGTGGGCACGCCCACTTTTGGAAGAATATGCCATAGAGGAACTGATTGATCCTAGGCTGGAAAAACGCTATTCAAGACATGAGGTCAATTGCATGCTGCATGCAGCATCATTATGCATTCGCAGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATACTGGAGGGTGACATGATCATGGAAACAAATTGCATTTCACATTCCGGCTATGATGTGGGAAATAGGAGTGGTAGAATTTGGGTGGGGCAGCACCATTACAGTGGTCCAATGTTAGAAGAAGAAGAGTCACTGGAATCCTTCAGCGGGAAGTTATCCCTTGAGAAATACAGGACCCCCTCCCACTGGAAAAGGGACAAGGTCAGAAGGACTACACGTGAAGATGTGTAA 2262 0.4363 MLMMSKEQEKRGKQEKGSDAAEKVIVAVKASKEIPKTALLWSLTHVVQPGDCITLLVVVPSQSSGRRLWVFPRFAGDCASGHKKSASGTTSEQKCEIITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAHVSWVVLDKHLKNEEKRCMEELQCNIVIMKHSQAKVLRLNLVGSRKKDPEVAGQVPSGKDEMHGKQTKKKNDCLNSIKVPVVTPISSPELGTPFTTTEAGTSSVSSSDLGTSPYFIPETNGDLKKKDTIKENQELDYANSDTESENLSTSSASLRFQPWITELLRHQQSTQRIEERPERPYDNKPHSSTTRALLEKFSKLDREAGIDISTRWTTELDFSGNMRETMALTRNAPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLAELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLEKRYSRHEVNCMLHAASLCIRRDPHSRPRMSQVLRILEGDMIMETNCISHSGYDVGNRSGRIWVGQHHYSGPMLEEEESLESFSGKLSLEKYRTPSHWKRDKVRRTTREDV 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1354 753 MobiDBLite consensus disorder prediction 308 325 - -
Mibi11g1354 753 Gene3D Transferase(Phosphotransferase) domain 1 485 692 - -
Mibi11g1354 753 PANTHER OS01G0750732 PROTEIN 275 687 - -
Mibi11g1354 753 SUPERFAMILY Protein kinase-like (PK-like) 393 683 IPR011009 -
Mibi11g1354 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 381 484 - -
Mibi11g1354 753 Gene3D HUPs 7 171 IPR014729 -
Mibi11g1354 753 MobiDBLite consensus disorder prediction 187 209 - -
Mibi11g1354 753 Gene3D Phosphorylase Kinase; domain 1 381 484 - -
Mibi11g1354 753 Pfam Protein kinase domain 413 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1354 753 ProSiteProfiles Protein kinase domain profile. 409 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1354 753 MobiDBLite consensus disorder prediction 229 254 - -
Mibi11g1354 753 FunFam Dual-specific kinase DSK1-like 15 170 - -
Mibi11g1354 753 MobiDBLite consensus disorder prediction 307 329 - -
Mibi11g1354 753 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 485 688 - -
Mibi11g1354 753 CDD STKc_IRAK 415 681 - -
Mibi11g1354 753 ProSitePatterns Tyrosine protein kinases specific active-site signature. 530 542 IPR008266 GO:0004672|GO:0006468
Mibi11g1354 753 MobiDBLite consensus disorder prediction 229 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1354 Mibi-ChrMibi11 32483635 32487301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1354 389 698 Trihelix Transcription Factor Family AT1G70460 52.500 1.61e-100 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi11g1354 Pkinase 2.6e-41 CL0016