Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1353 ATGAGAATGAGATCAGCTCTAATGGTGGCAATATATGACAAGCAATTGAAGCTTTCAAGTTCAGCAAGAAGAAGACACACAATTGGGGAAATAGTAAATTACATAGCAGTTGATGCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATAGCACATGGGCTTATTCATTACAACTTTTTCTGGGCATTGCGGTCCTATTTGGTCTTGTTGGTATTGGTGCTCTTCCAGGTCTAGCCCCTCTTCTCATATGTAGCCTTCTTGATATACCTTTTACAAATATTCTTCATAAGTGTCAGTCAGAATTTATGGTTGCCCAAGATGAACGTCTGAGGTTAACTTCAGAGATACTAAATAATATGAAAATAATAAAGTTTCAATCTTGGGAGGAAAAGTTCAGGGCTTTAGTAGAAACCCTTCGTGCCAAAGAGTTCAAATTTCTGTCTAAGGCACAATTTTTGAAAGCTTACGCATCATCAACCTATTGGATTTCTCCTACCATTGTTTCATCTGTAATCTTCCTAGGATGTTCTCTTTTCAAAAGTGCTCCCTTGAATGCTGGAACTATATTCACAGTTCTTGCAACTTTGAGGAGCATGGGTGAACCTATTAGAATGATCCCACAGGCTATTTCTGTCTTGATCCAAGTTAAGGTCTCTTTTGATCGTCTCAATTTGTTTTTGCTCGATAATGAGCTAAACGATGAAGATATTGGAGGAAATTCAATGCCAAGTTCAATTAATAGTGTGGAGATTCAAGGTGGAAACTTCATTTGGGATCTGGAATCAATGTCTCCAACTTTGAGAAGTTTGAATGTAGAAACCAAGTGGGGGCAGAAAATTGCAGTTTGTGGACCAGTCGGAGCTGGAAAATCATCCCTCATTCATGCAATACTCGGAGAGATACCCAAAATCTCAGGAACTGATTGTGTTATGGCTGCTCTAAGGAAGAAAACTGTCATCTTAGTGACTCATCAGGTGGAGTTTCTTGCACAATTTGATAAAATCTTGGTTATGGAGGGGGGAATAGTTACACAATCAGGATGTTATGAAGATCTTATGATAGAAGGGGCAACCTTTGAACTGCTTGTAAATGCACATAGAGAAGGAATATCAGGGTCTAATCAAAAGAGTGAAATTCTAAATGAATCTGAAGATGAAGATAGTGTTCATCAGTCATTGGAGTCTCATGTCACTATGGATAATATTTGTGCGGATAAGTTTTGTACAGGAGTTCAAATTGGGGTGCAACTTACACAGGACGAAGAAAAGGAGATTGGTGATGTTGGCTTGAAGCCATTTTGGGATTATCTTTATCTCTCTAAAGGATCAATGCTCATCTGTTCGAGCATTTTGGCACAGTTGACTTTTATTGCTCTGCAGTCAGCATCATTCTTTTGGCTTGCTCTAGCCATTGAATCCCCAAATGTAACAAATGTCATTTTGATTGGAGTTTACACAATAGTTTCACTTCTAGGTGTTGTCTTTGCGTGCTTAAGGTCTATCATCAGTGCTCATCTTGGATTAAAAGCTTCTACATCTTTCTTCTCTTGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTTTTCTTTGACTCAACCCCAGTAGGGAGGATTATGACCCGGGTTTCATCAGATTTGAGCATTTTAGACTTTGATATAGCTCATGCCATGGACCTTGTGACAGCTGGTGGAACTGAACTCCTGGCAACCATTGGAATAATAGCTTCTGTCACGTGGCAAATAAGGTATCGTCCAAATGCTCCATTAGTGCTAAAGGGAATTACATGTACATTCAAAGAAGGGAGTAGAGTTGGAATTGCAGCGAGAACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTTTGTTTTGCTTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATAGGATTAGCATATTACCAATTGGTTTGAAGGATTTGAGGATGAAGCTAAGCATTATTCCTCAAGAACCGACTCTATTCAGGGGTAGCATCAGAACCAACTTGGATCCTCTTGGCCTCTATTCTGATAATGAAATATGGGAGGTGAATTATTTAATGAATAAATTCTTATGA 2076 0.3882 MRMRSALMVAIYDKQLKLSSSARRRHTIGEIVNYIAVDAYRMGEFPWWFHSTWAYSLQLFLGIAVLFGLVGIGALPGLAPLLICSLLDIPFTNILHKCQSEFMVAQDERLRLTSEILNNMKIIKFQSWEEKFRALVETLRAKEFKFLSKAQFLKAYASSTYWISPTIVSSVIFLGCSLFKSAPLNAGTIFTVLATLRSMGEPIRMIPQAISVLIQVKVSFDRLNLFLLDNELNDEDIGGNSMPSSINSVEIQGGNFIWDLESMSPTLRSLNVETKWGQKIAVCGPVGAGKSSLIHAILGEIPKISGTDCVMAALRKKTVILVTHQVEFLAQFDKILVMEGGIVTQSGCYEDLMIEGATFELLVNAHREGISGSNQKSEILNESEDEDSVHQSLESHVTMDNICADKFCTGVQIGVQLTQDEEKEIGDVGLKPFWDYLYLSKGSMLICSSILAQLTFIALQSASFFWLALAIESPNVTNVILIGVYTIVSLLGVVFACLRSIISAHLGLKASTSFFSCFNNAIFKAPMLFFDSTPVGRIMTRVSSDLSILDFDIAHAMDLVTAGGTELLATIGIIASVTWQIRYRPNAPLVLKGITCTFKEGSRVGIAARTGSGKSTLVSALFCLVDPARGDILIDRISILPIGLKDLRMKLSIIPQEPTLFRGSIRTNLDPLGLYSDNEIWEVNYLMNKFL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1353 691 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 449 581 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1353 691 Gene3D ABC transporter type 1, transmembrane domain 418 579 IPR036640 GO:0005524|GO:0016020
Mibi11g1353 691 Gene3D - 310 395 IPR027417 -
Mibi11g1353 691 CDD ABC_6TM_ABCC_D1 1 223 IPR044746 GO:0140359
Mibi11g1353 691 FunFam ABC transporter C family member 10 1 231 - -
Mibi11g1353 691 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1353 691 SUPERFAMILY ABC transporter transmembrane region 431 581 IPR036640 GO:0005524|GO:0016020
Mibi11g1353 691 Pfam ABC transporter transmembrane region 446 581 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1353 691 Pfam ABC transporter transmembrane region 1 195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1353 691 Gene3D - 231 309 IPR027417 -
Mibi11g1353 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 354 IPR027417 -
Mibi11g1353 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 578 683 IPR027417 -
Mibi11g1353 691 Pfam ABC transporter 591 683 IPR003439 GO:0005524
Mibi11g1353 691 Gene3D - 580 689 IPR027417 -
Mibi11g1353 691 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 305 - -
Mibi11g1353 691 SUPERFAMILY ABC transporter transmembrane region 2 229 IPR036640 GO:0005524|GO:0016020
Mibi11g1353 691 Gene3D ABC transporter type 1, transmembrane domain 1 230 IPR036640 GO:0005524|GO:0016020
Mibi11g1353 691 Pfam ABC transporter 268 333 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1353 Mibi-ChrMibi11 32461439 32466432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1353 564 669 Calmodulin-binding Proteins AT2G36910 30.556 7.31e-09 57.4