Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1349 ATGGCCAACTATGGATATCCAGAAGGGGATTTCTCATGGATTTGTCTACGAGATTCTTATGTCACTTCCTTTTGCACTCAAAGGAGCATCACTGACGCCGTTGATATTCTCTTTCTCTGTGCTTTTTACATATCCTTGCTTTTCAGAAAAAACAATGCAAGTGACAACCACAGAAAAGGATGGTTTTGTTCAGTTGTCTCAGTCTGTTGTGCTCTCATGAGCATTGCATATTTCTGTTATGGTCTGTGGTGTCTTATTTACAAATCTGAAGGATTTGGGAAGCTGAGGTGGTTAGTTTATATTTTCAGAGGACTTGTCTGGATTTCTCTGACAGTTTCTTTACTTGTTCAGAGATCTAAATGTGTGGAAGTTCTAAACTTTGTTTGGTATGTCTCTTCATGCGCCCTTATTTCAGCTCTCAATATTGATATTGTGTTCAGAGAGCATAATCTTCAAATACTTGATCTGGTTCAATGGCTTGTCCATTTTTCACTTGTTTTCTGTGCCTTCCAAAACCTTTATTTTGCACCTCAAAGCACTCAAAATAGCACCATATCAGAGCCTCTTTTAGCTCAAAAGGATGAACATCAACAATCAAAACTTGCACGTGCCAATTTTCTCAGCAAGTTGACTTTCTCTTGGATTAATTCCTTATTGAATTTGGGCTATTCAAAGCCATTAGATCTTGAAGACATCCCATCTCTTGTTCCTGAAGATGAAGCTGCTTTGGCCTACCAAAAGTTCTCGCATGCATGGGATTCCTTGTCAAGAAAAAGGAGCGAAAGCCATAGTACCAAGAACTTGGTCATGTGGTCTATATTAAGAGTTCACTTGAAAGAGAACATTCTCATAGCAATCCTGGCATTGCTCAGGACAATTTCTGTATCACTTTCTCCTCTGTTGCTCTATGCTTTTGTGAGATATTCAAAAAATAAATATGGAAACCTAAGGGAGGGTCTTACCATAGTAGGCTGTCTGATTATTTGCAAGTTATTTGAATCTCTTTCTCAAAGGCACTGGTTTTTTCAATCAAGAAGGTCAGGAATGAAAATGAGATCAGCTCTAATGGTGGCAATATATAACAAGCAACTGAAGATTTCAAGTGTAGCCAGAAGAAGACACTCAACCGGGGAGATAGTAAATTACATTGCAGTTGATGCATATAGAATGGGAGAATTTCCATGGTGGTTTCACACCACGTGGACTTCAGCATTACAACTTTTTCTGTCAATTGTGGTCCAATTTGGTGTTGTTGGTCTTGGTGCTCTTCCTGGGTTAGTCCCTCTTCTCATATGTGGCTTTCTTAATATACCCTTTGCAAAGATCATTCAAAAGTGTCAGTCAGAATTTATGGTTGCACAGGATGAACGTCTAAGGTCAACTTCAGAGATCCTAAATAACATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACTTTGGTTGAAAGCCTCCGCTCCAAAGAGTTCAAGTGGCTGGCCAAGGCACAGCTCTTAAAAGCTCATGGTTCCTTTATCTATTGGATGTCTCCTACGATTGTTTCTGCTGTAATCTTCCTAGGATGTGCACTTTTACAAAGTGCCCCTTTAAATGCTGGAACCATATTCACTATTCTTGCTACTTTGAGGGCCTTGAGTGAGCCTGTTAGAGTGATTCCAGAGGCTCTTTCAATTGTAATTCAGGTTAAGGTATCCTTTGATCGTCTCAACACTTTTTTGCTGGATGATGAGCTAAGTGATGACATCACTGGAGGAAACGTCAAGCAAAATTCAGTCCATAGCGTAAAAATTCAAGATGGCAACTTCAATTGGGATCCGGTATCAACGTCTCCAACTTTGAGATGTTTGAATTTAGAAATCAAATGGGGGCAGAAAGTTGCTGTTTGTGGACCAGTTGGAGGTGGAAAATCATCCTTGGTGTATGCAATTCTCGGCGAGATACCAAAAGTTTCAGGAACTGTTAATGTGGGTGGATCAGTTGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGCGATAATATACTCTTCGGCAAACCTATGGACAAAACCAGATACATGAATGCGATAAAAGCTTGTGCCTTGGATAAGGATATCAATTCTTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATCAACTTGAGTGGAGGACAGAAACAAAGAATTCAACTGGCTCGAGCAGTATATAATGATGCTGATATTTATCTCTTAGATGATCCTTTCAGTGCAGTGGATGCTCATACTGCTGCTATTCTATTCAATGATTGTGTCATGAATGCTCTGAAGAAGAAATCTGTAGTTCTAGTAACTCATCAAGTGGAGTTTCTCTCACAAGTTGATAGAATCCTTGTAATGGACGGTGGAGTAGTTACCCAATCAGGATGTTATGAAGATCTTCTAACAGAAGGGTCTGCCTTTGAACAACTTGTAAATGCCCATAGAGAAGCGATATCAGGGTCAGATCAAACCAATGAGATCCCAGGAGAATTTGAAGATTCAATAAAAGTTCTTCAGCCATTGGAGTCTTATGGATTTCATCTCTCTGAGGACCATAACTCTGAGGAGGATTCTACTAAAGATCAAGTCTTACAACTTACACAAGAAGAAGAAAAAGAGACTGGAGATGTTGGATGGAAGCCATTTTGCGTTTATCTTTATGTCTCCAAAGGATCAGTACTTCTGTGTTTGAGCATTTTAGCACAGGCAGCTTTTGTTGGTTTGCAAGCAGCAGCAACGTTTTGGCTTGCTCTAGCCATTGAAGTACCAAAAGTTACTAATGTCATCTTGATTGGAGTTTACACAGTAGTTTCACTTCTAAGTGTTGGATTTGTGTGGCTAAGATCTATAATGGGTGCACGACTTGGCTTAAAAGCTTCTACTTCTTTCTTCTCTGGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTCTTCTTTGACTCAACCCCAGTAGGGAGAATTTTGACCCGAGCTTCATCAGATTTGAGTGCCGTAGACTTTGATATACCTTATGCATTCACCTTTGCAGCAGCTGGTGCAATAGAAGTTCTGACAGTAATTGGAATAATGGTTGCAGTCACGTGGCAAGTACTTATTGTGGCAATTCCCGCCTTGATAGCTACTATATATATTCAGGGCTATTATCTAGCCTCTTCAAGGGAACTAATGAGGATTAATGGAACAACAAAAGCTCCCGTTATGAATTTCGCCTCTGAGACATCACTTGGAGTGGTGACTGTGAGAGCTTTCAACATGGCCGAAAGATTTTACCAAAAGTACCTGAAGCTTGTGGACACGGATGCAAAACTATTCTTTCATTCTAATGTGGCCACTGAATGGTTAATTTTGAGGATTGAAGCACTTCAAAATTTGACACTATTTACAGCAGCTTTACTGCTTGTTCTCCTTCCAAATGGACTTGTGTCCCCAGGCCTTGCAGCACTCTCCCTTTCATATGCATTTTCATTAACAATATGCCAAACTTTTATGAGTCGGTGGTTCTGCAACTTATCAAATTATATTATTTCTGCCGAAAGAATTAATCAGTTCATTCACTTACCTGAAGAGCCTCCTGCAATAGTGGAGAACAGAAGACCTCCACTTTCATGGCCTTCCAAGGGTAGGATTGAACTTCAAAATCTTGAGATAAGGTATCGTCCAAATTCTCCATTAGTCCTTAAGGGAATCACATGTACATTCAAAGAAGGGAGTAGAGTTGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTTTGTTTCGCTTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATAGGATCAGCATATTAGCAATGGGTTTGAAGGATTTGAGGATGAAGTTGAGCATCATTCCTCAAGAACCCACTCTGTTCAAGGGTAGCATCAGAACCAACTTGGATCCTCTTGGCCTTTATTCTGATAATGAAATATGGGAGGCTTTAGAGAAATGCCAGCTCATTTCAACAATCAGGAGGCTACCAGGTTTATTGGACACTTCTGTGAATGATGAAGGTGAGAATTGGAGCGTGGGACAACGTCAGCTATTATGCCTAGGAAGAGTACTTCTGAAGAGAAATAAAATTCTTGTTCTTGATGAAGCTACTGCTTCCATTGATTCTACCACAGATGCCATTCTACAGAAAGTTATTAGACAAGAATTTGCAGGTTGCACAGTTATAACCATAGCTCATCGAGTTCCAACTGTATTAGACAGTGATATGGTTATGGTTCTCTCTTATGGTATGCTCATAAATATTGTTTTTCTTCTCCTTCCTCTTCTTTTTTAA 4323 0.3983 MANYGYPEGDFSWICLRDSYVTSFCTQRSITDAVDILFLCAFYISLLFRKNNASDNHRKGWFCSVVSVCCALMSIAYFCYGLWCLIYKSEGFGKLRWLVYIFRGLVWISLTVSLLVQRSKCVEVLNFVWYVSSCALISALNIDIVFREHNLQILDLVQWLVHFSLVFCAFQNLYFAPQSTQNSTISEPLLAQKDEHQQSKLARANFLSKLTFSWINSLLNLGYSKPLDLEDIPSLVPEDEAALAYQKFSHAWDSLSRKRSESHSTKNLVMWSILRVHLKENILIAILALLRTISVSLSPLLLYAFVRYSKNKYGNLREGLTIVGCLIICKLFESLSQRHWFFQSRRSGMKMRSALMVAIYNKQLKISSVARRRHSTGEIVNYIAVDAYRMGEFPWWFHTTWTSALQLFLSIVVQFGVVGLGALPGLVPLLICGFLNIPFAKIIQKCQSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTLVESLRSKEFKWLAKAQLLKAHGSFIYWMSPTIVSAVIFLGCALLQSAPLNAGTIFTILATLRALSEPVRVIPEALSIVIQVKVSFDRLNTFLLDDELSDDITGGNVKQNSVHSVKIQDGNFNWDPVSTSPTLRCLNLEIKWGQKVAVCGPVGGGKSSLVYAILGEIPKVSGTVNVGGSVAYVSQTSWIQSGTIRDNILFGKPMDKTRYMNAIKACALDKDINSFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMNALKKKSVVLVTHQVEFLSQVDRILVMDGGVVTQSGCYEDLLTEGSAFEQLVNAHREAISGSDQTNEIPGEFEDSIKVLQPLESYGFHLSEDHNSEEDSTKDQVLQLTQEEEKETGDVGWKPFCVYLYVSKGSVLLCLSILAQAAFVGLQAAATFWLALAIEVPKVTNVILIGVYTVVSLLSVGFVWLRSIMGARLGLKASTSFFSGFNNAIFKAPMLFFDSTPVGRILTRASSDLSAVDFDIPYAFTFAAAGAIEVLTVIGIMVAVTWQVLIVAIPALIATIYIQGYYLASSRELMRINGTTKAPVMNFASETSLGVVTVRAFNMAERFYQKYLKLVDTDAKLFFHSNVATEWLILRIEALQNLTLFTAALLLVLLPNGLVSPGLAALSLSYAFSLTICQTFMSRWFCNLSNYIISAERINQFIHLPEEPPAIVENRRPPLSWPSKGRIELQNLEIRYRPNSPLVLKGITCTFKEGSRVGIVGRTGSGKSTLVSALFRLVDPARGDILIDRISILAMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDNEIWEALEKCQLISTIRRLPGLLDTSVNDEGENWSVGQRQLLCLGRVLLKRNKILVLDEATASIDSTTDAILQKVIRQEFAGCTVITIAHRVPTVLDSDMVMVLSYGMLINIVFLLLPLLF 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1349 1440 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 282 563 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1349 1440 FunFam Multidrug resistance-associated protein member 4 1200 1432 - -
Mibi11g1349 1440 Gene3D ABC transporter type 1, transmembrane domain 251 580 IPR036640 GO:0005524|GO:0016020
Mibi11g1349 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1216 1434 IPR003439 GO:0005524
Mibi11g1349 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 820 IPR027417 -
Mibi11g1349 1440 CDD ABCC_MRP_domain2 1214 1429 - -
Mibi11g1349 1440 SUPERFAMILY ABC transporter transmembrane region 901 1198 IPR036640 GO:0005524|GO:0016020
Mibi11g1349 1440 FunFam ABC transporter C family member 5 865 1197 - -
Mibi11g1349 1440 FunFam Multidrug resistance protein associated1 576 839 - -
Mibi11g1349 1440 CDD ABCC_MRP_domain1 597 796 - -
Mibi11g1349 1440 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 597 820 IPR003439 GO:0005524
Mibi11g1349 1440 SUPERFAMILY ABC transporter transmembrane region 270 577 IPR036640 GO:0005524|GO:0016020
Mibi11g1349 1440 Gene3D - 1199 1432 IPR027417 -
Mibi11g1349 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1206 1429 IPR027417 -
Mibi11g1349 1440 FunFam ABC transporter C family member 10 265 579 - -
Mibi11g1349 1440 Pfam ABC transporter 617 749 IPR003439 GO:0005524
Mibi11g1349 1440 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1426 - -
Mibi11g1349 1440 CDD ABC_6TM_ABCC_D2 898 1191 IPR044726 GO:0140359
Mibi11g1349 1440 SMART AAA_5 624 797 IPR003593 -
Mibi11g1349 1440 SMART AAA_5 1242 1438 IPR003593 -
Mibi11g1349 1440 Pfam ABC transporter transmembrane region 284 550 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1349 1440 Pfam ABC transporter transmembrane region 936 1160 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1349 1440 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 904 1179 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi11g1349 1440 Gene3D ABC transporter type 1, transmembrane domain 865 1197 IPR036640 GO:0005524|GO:0016020
Mibi11g1349 1440 Gene3D - 581 837 IPR027417 -
Mibi11g1349 1440 CDD ABC_6TM_ABCC_D1 283 571 IPR044746 GO:0140359
Mibi11g1349 1440 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524|GO:0016887
Mibi11g1349 1440 Pfam ABC transporter 1233 1381 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1349 Mibi-ChrMibi11 32370980 32377963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1349 597 808 Calmodulin-binding Proteins AT2G36910 29.646 3.55e-20 95.9