Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1347 ATGAATTTTGCCACAGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACAAGGCAGACAGATTTTATCGAAACTACCTCAAGCTTGTGGACATAGATGCAAAACTATTGTTTCATTCTAATGTGGCCACAGAATGGTTTATTTTAAGGATTGAAGTACTTCAGAATTTGACACTATTCACAGCAGCTTTACTGCTTGTTCTACTTCCAAAGGGACTTGTGTCACCAGGACTTTCTCTATTATATGCTTTGTCATTAACAGGATGCCAAATTTTTGTTAGTACTTGGTTCTGCAAATTATCAGATTATATTATTTTTGTTGAAAGAATTAATCAGTTCATTCACATGCCAGAAGAGCCTCCTGCAATTGTGGAGAACAGAAAACCTTCACTTTCATGGCCCTCCAAGGGTAGGATTGAACTTCAAAATCTTGAGGTAAGGTATCGTCAAAATGCTCCATTAGTGTTAAAGGGAATCACATGTACATTCAAAGAAGGGAGTAGGGTTGGAATTGTGGGGAGGACTGGAAGCGGAAAAAGTACACTTGTAAGTGCTTTGTTCCGCTTGGTTGACCCTGAGAGAGGTGACATTCTTATAGATGGGATCAGCATATTTCCAATGGGTTTGAAGCATTTAAGAATGAAGCTGAGCATTATTCCACAAGAACCCACTCTTTTTAGGGGTAGCATCAGAACTAACTTGGATCCTCTAGGCCTTTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGCCAGCTCAAGGCAACGGTCATCAATCTACCAAATCTACTGGACTCCTCGCTCTGAGTACTTCTCAAGCGAAACAGAATTCTTGTTCTTGATGAGGCTACTGCCTCCATTGATTCTTCCACTGACTCCATTTTACAAAGAGTTATTAGGCAAGAGTTTGCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTTATAGATAGTGATATGATCATGGTTCTCTCTTACGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTTATGCAGACAAATTCTTCTTTCTCTAAACTTGTTTCAGAGTATTGGTCCAGCTGCAGCAAGAACCTCTCCCAAATCCCATATCATTAA 1116 0.4005 MNFATETSLGVVTVRAFNKADRFYRNYLKLVDIDAKLLFHSNVATEWFILRIEVLQNLTLFTAALLLVLLPKGLVSPGLSLLYALSLTGCQIFVSTWFCKLSDYIIFVERINQFIHMPEEPPAIVENRKPSLSWPSKGRIELQNLEVRYRQNAPLVLKGITCTFKEGSRVGIVGRTGSGKSTLVSALFRLVDPERGDILIDGISIFPMGLKHLRMKLSIIPQEPTLFRGSIRTNLDPLGLYSDDEIWKALEKCQLKATVINLPNLLDSSLXVLLKRNRILVLDEATASIDSSTDSILQRVIRQEFAECTVITVAHRVPTVIDSDMIMVLSYGKVVEYDEPSKLMQTNSSFSKLVSEYWSSCSKNLSQIPYH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1347 371 SUPERFAMILY ABC transporter transmembrane region 2 121 IPR036640 GO:0005524|GO:0016020
Mibi11g1347 371 FunFam ATP-dependent bile acid permease, putative 125 270 - -
Mibi11g1347 371 Gene3D - 124 356 IPR027417 -
Mibi11g1347 371 Gene3D ABC transporter type 1, transmembrane domain 1 123 IPR036640 GO:0005524|GO:0016020
Mibi11g1347 371 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 358 - -
Mibi11g1347 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 355 IPR027417 -
Mibi11g1347 371 SMART AAA_5 166 341 IPR003593 -
Mibi11g1347 371 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 356 IPR003439 GO:0005524
Mibi11g1347 371 CDD ABCC_MRP_domain2 138 340 - -
Mibi11g1347 371 Pfam ABC transporter 157 286 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1347 Mibi-ChrMibi11 32335657 32339175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1347 119 354 Calmodulin-binding Proteins AT2G36910 29.231 3.59e-27 111