Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1336 ATGCATCTTGCCAGAATTCAGATTGAGAATAATGGAAAGGAAACAAAAGGGGAAGTTCTATGGGGTGATGAAAAGGAGAAGATGGCCACTGTATCAGGGCAGCTTATATGGGAGATCGTGAAGAAGAACAACTGTTTTTTGGTTAAAGAGTTTGGCAGAGGAACTCAGAGCGTTGAGTTCAGCAAAGAGAGCAATAATCTCTACAATCTCAACTCTTTCAAGCATTCTGGTTTGGCAAACAAGAAGACCGTCACTATTCAACCTGCGGGTAAAGATCAATCGGTGTTGCTTGCAACTACCAAGACAAAGAAACAGAACAAGCCTGCTTCTTTGCTTCATAAATCTGTCATGAAAAAGGAGTTCCCAAGAATGGCAAAAGCTGTGGTAAACCAGGTGGCAAACAACCACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTCCTAAGAAGAAGAACAGGCAGGCTGTCAAGGTCCGTGGCAGAAAGTGA 534 0.4419 MHLARIQIENNGKETKGEVLWGDEKEKMATVSGQLIWEIVKKNNCFLVKEFGRGTQSVEFSKESNNLYNLNSFKHSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFPRMAKAVVNQVANNHYRPDLKKAALARLSAVHRSLKVAKSGPKKKNRQAVKVRGRK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1336 177 Gene3D - 32 160 - -
Mibi11g1336 177 MobiDBLite consensus disorder prediction 158 177 - -
Mibi11g1336 177 Pfam Ribosomal L28e protein family 35 155 IPR029004 -
Mibi11g1336 177 FunFam 60S ribosomal protein L28 32 160 - -
Mibi11g1336 177 PANTHER 60S RIBOSOMAL PROTEIN L28 28 177 IPR002672 GO:0003735|GO:0005840|GO:0006412
Mibi11g1336 177 MobiDBLite consensus disorder prediction 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1336 Mibi-ChrMibi11 32207305 32211521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1336 28 170 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.825 4.15e-78 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1336 11 32207305 32211521 Mibi04g0565 04 10957577 10959591 CCT
Mibi04g0565 04 10957577 10959591 Mibi11g1336 11 32207305 32211521 ECH
Mibi11g1336 11 32207305 32211521 Mibi11g1336 11 32207305 32211521 ECH