Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1317 ATGGAGAGGTCACCACAGTGGATTTTATGGTTTGCCTTGATCCAACTTTTCCTCACTCTCAACGACGCAAGGCTCAATGGAAGGAAACTCACCACATCTGATTTCATAAGCATTGACTGTGGAGCAACCGAAGGATACACTGATCCTGGAACTGGGATTTCATATCAGTCAGATGCAGGCTTTGTAGACACAGGCTATAATTCCATGGTGGCGCCTAATCAAAGATACATAGTAAATTATTTTGGGAGACAACTTCAGACACTAAGAAGTTTCCCTGAAGGAAAGAGGAATTGCTACACCCTGAAACCAAAACAAGGCAAAAAACAAAACTACCTCATCCGAGCTTTCTTCACATATGGAAACTATGACGGCAAAAATCAAACTCCCAGTTTTGACTTGTACCTGGGTGTCAACTATTGGGCAAGTATTACTCCAATTAATTATTATACATTTGCGGAGGTCATCCATACTCCTTTAACCGACACCATACACTTTTGCCTTGTGAAGTCAGGCAAAGGAATACCTTTCATTTCCACATTGGAACTACGACCTCTCACTAATTCTATTTATAATACTCCCTCCCCTTCTCAATCACTTTTATTCCTCTATAGAAGAGTTGATGTTGGCACAACCACCAGTACAGACAAGTACATCAGGTACATGGATGACATCTATGATCGTATGTGGCTCATGGACAACATAACCTCTAATTTGCAAGATTGGAATGTGTTTAATAGATCTGTTGCTATTGATGTTCGGAGCACAAATAATCCGTATAGATTACCAGCACGAGTGCTACAATCTGCAGTCAAAACATCGAATCACTCCTCTGCATTAAACATTGACTGTTCTGCTTGGGAGTTTCAATTTGAATCTTCTTTCACATATTACGTCTTTTTTCATTTTGCTGAAATTGAGCAGCTTCCCTCTGGGCAAAAAAGAGTAATCGATATTACTGTTAATAATGAAAACATCCTCCAAAAGCCCATAACTCTTGAATACTTGAAGCCTCTCACAGTTTCTACAGTTACAAATCAAAAATGTATTCGCTTCAGCATTAGTGCCACAAACTTGAGCATGAGCAAATTAACAGGTGACATATCTATTTCCTTCTCACAGCTTATGGAGTTACAGTCCCTGGATTTGTCAGAAAATAACTTATCAGGAACAATACCAGAATTTCTAGCTGAATTGCCAAAGTTGAAAGTCCTTAATTTGAGAGGCAACAAGCTTACTGGTTCAATTCCCAAGGCTCTCAAGGGGAAGTCAAATTTGGAAATGAGTTTGGAAGGTAACCCTGATGTTTGCTTGACGGACCCATGCAAAAAGCACAAGTTCGTTCTCCCACTGATAGCATCTGTTTCTGCTCTGGTTGTGATCTTGGTTTCGCTTGGAATGTGGATCTCTAGAATTAAAAGACTGAAAGGGCATGGATCATCAAAACAAAGAAATCAAGAATTTTCTTACTCTAACATTCTTGAGATCACTAATAACTTTCACAACTTAATTGGAGAAGGAGGATTCGGGAAGGTTTATTTAGGCACTCTTAAGAATGATACTCATCTGCAAGTTGCAGTAAAATTACTTTCTCAATCATCAGTTCAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTTTTGATGGTTGTTCATCATAGACATGTGGTTTCTCTGATTGGATATTGCGAAGAAACTGGTGCGAAGGCATTAATTTATGAGTATATGGCTAATGGTGATCTCCGCCAACATTTATCGGGTAACAACGAGCATGCTTTGAAATGGAAGAACAGGCTTCGAATTGCACTAGACGCCGCGTGTGTTGGTTACCTTGATCCTGAGTTTCAAAGCTCTGGCAACCTCACAAAAGGAAGTGATATATTCAGTTTTGGAATCATTTTACTAGAGCTAATCACCGGACAACCAGCAGCTAAAAGGAAACCAGACTATACTTTCACTCTCCTCCTTCATTGGGTTGCCCCTAAAGTCAAAAACAAGGAAATCCAGTCCATTGTTGATCCAAAGCTACAAGGAAAATATAGTATTGATTCGGTTTGGAAATTTCTAGAGATGGCCATGTCATGCACTGAACCTTCTGCAATTCAAAGGCCTGATATAAGTCAAATAGTTTATGAACTAAGAGAATGTTTGGCTATGGAGATAAGCATGGAAGTGACCAGTGATCTCTACCCAAATTCAAGCAGTTCAACAAATACGAGTGCTATGCAATTTGATTCAGACATCAGCGTACTGTCTGGAAGATAG 2262 0.3952 MERSPQWILWFALIQLFLTLNDARLNGRKLTTSDFISIDCGATEGYTDPGTGISYQSDAGFVDTGYNSMVAPNQRYIVNYFGRQLQTLRSFPEGKRNCYTLKPKQGKKQNYLIRAFFTYGNYDGKNQTPSFDLYLGVNYWASITPINYYTFAEVIHTPLTDTIHFCLVKSGKGIPFISTLELRPLTNSIYNTPSPSQSLLFLYRRVDVGTTTSTDKYIRYMDDIYDRMWLMDNITSNLQDWNVFNRSVAIDVRSTNNPYRLPARVLQSAVKTSNHSSALNIDCSAWEFQFESSFTYYVFFHFAEIEQLPSGQKRVIDITVNNENILQKPITLEYLKPLTVSTVTNQKCIRFSISATNLSMSKLTGDISISFSQLMELQSLDLSENNLSGTIPEFLAELPKLKVLNLRGNKLTGSIPKALKGKSNLEMSLEGNPDVCLTDPCKKHKFVLPLIASVSALVVILVSLGMWISRIKRLKGHGSSKQRNQEFSYSNILEITNNFHNLIGEGGFGKVYLGTLKNDTHLQVAVKLLSQSSVQGHREFRSEVELLMVVHHRHVVSLIGYCEETGAKALIYEYMANGDLRQHLSGNNEHALKWKNRLRIALDAACVGYLDPEFQSSGNLTKGSDIFSFGIILLELITGQPAAKRKPDYTFTLLLHWVAPKVKNKEIQSIVDPKLQGKYSIDSVWKFLEMAMSCTEPSAIQRPDISQIVYELRECLAMEISMEVTSDLYPNSSSSTNTSAMQFDSDISVLSGR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1317 753 Gene3D Transferase(Phosphotransferase) domain 1 478 608 - -
Mibi11g1317 753 PANTHER OS07G0107800 PROTEIN-RELATED 350 605 - -
Mibi11g1317 753 ProSitePatterns Protein kinases ATP-binding region signature. 503 527 IPR017441 GO:0005524
Mibi11g1317 753 Pfam Leucine rich repeat 376 427 IPR001611 GO:0005515
Mibi11g1317 753 FunFam Leucine-rich repeat receptor-like kinase 340 438 - -
Mibi11g1317 753 Pfam Malectin-like domain 38 358 IPR024788 -
Mibi11g1317 753 SUPERFAMILY Protein kinase-like (PK-like) 483 728 IPR011009 -
Mibi11g1317 753 ProSiteProfiles Protein kinase domain profile. 497 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1317 753 PRINTS Leucine-rich repeat signature 377 390 - -
Mibi11g1317 753 PRINTS Leucine-rich repeat signature 398 411 - -
Mibi11g1317 753 SUPERFAMILY L domain-like 357 439 - -
Mibi11g1317 753 Gene3D Transferase(Phosphotransferase) domain 1 609 729 - -
Mibi11g1317 753 Gene3D - 202 363 - -
Mibi11g1317 753 Gene3D Ribonuclease Inhibitor 364 451 IPR032675 -
Mibi11g1317 753 FunFam Leucine-rich repeat receptor-like protein kinase 475 574 - -
Mibi11g1317 753 Pfam Protein tyrosine and serine/threonine kinase 607 712 IPR001245 GO:0004672|GO:0006468
Mibi11g1317 753 Pfam Protein tyrosine and serine/threonine kinase 499 606 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1317 Mibi-ChrMibi11 31803297 31813880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1317 9 729 Receptor kinase-like Gene Family AT2G28990 34.248 3.77e-132 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g1317 Malectin_like 4.4e-86 CL0202