Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1315 ATGGAGATCGTACCACTTTGGATTCTGGCTTCGATTGTGTCTCTTTCTTCTATCATCGATCTTCCAAAGTCAGCCCAAGTTGTTGCATCTGATGTTAATACTGATTCAGACAGGGAGATAAGCATTGATTGTGGAGTAACTCAAGAAAATCAGGATACAAATGGATTTCATCATGAGCCAGATAATGCAGAGTTTGTAGAAACTGGAGAAATATATAATATATCTTTTAATAATCACACATTTGATTATAGCCAAGAACAAGTTGGGGAACAAATGAGAACACTGAGAAGTTTCCCAGAAGGAAAAAGAAATTGCTACACACTCAAACCCAAACAAGGCAAAAACAACAACTATCTCATTAGGGCTTACTTTGCATATGAAAACTATGACAACAAAAGCTCACTTCCATACTTCCATTTATATCTCGGTGTCAATTTCTGGGCAGAAATTAAGTTCTACAATGCTAGTGCAATTCGTCGGAAAACAGTTGCTCAAGTGTCCTCAACAAACTACATCGATGTATGTCTCATAAACGTTGGTAAAGGAATACCTTTTATCTCGTTGTTAGAACTATGGCCTTTATCATATTCTATATACAGAGCTACCTCTAGTTTGCTGCCATTAGGCCTCATGACATGCGTTAACTTGGGTATGTCTGAAGACTTTCAATTTATAAGATATGCAGATGATATCTATGGCAGGTCCTGGTTCAATGGACAGATGGACAACTCAGAGAAATTATCCACATCAGAAGCAATTGATAGTGATGTAAAAGATTACAGACTACCAAATGAAGTGTTAAGAGCTGCAGTCAAAGCACTGAACGTGTCGTCTTCCTTATATATCAACTTGAAAATGATTAATTTTACAGAAGATAGTGAACACTATGTTTACCTTCATTTTTTTGATTTTGAGGATCATTCTAGGGGTCAAGTAAGAAGCATGGAAATTACTTTCACTGATGCCATCCGAGAGATTGTAACTCTTAAATACCAGGATGTCTATACCTTGGTTAAGAGAATTCCAAAAGGGGTTCCCATAAATCGTATTTCAATTACATCAACCCCAGGTTCAAGTTTGCCCCCCATGATCAATGCTTATGAGATTTATAGAGCACTACCCCAAACAAATACCCCAACTCATGAAGAAGATGTTGATGCTATGCGGGACATCAAACATGCTTATAATAACATAGTGAGAATCAGTTGGCAAGGCGATCCCTGCATTCCAAAAGAGTATAGATGGGAAGGTGTTACCTGTAATTACTCTGACAGTATTCCAAGGGTCACTTCTTTGAACTTGAGCTCAAGCAAATTGACAGGACCGATTGTAACTTCGTTCTCCAAACTCATGACGTTGGAGGTCTTGGATTTGTCAAATAACCAATTAAGAGGAGAAATACCAGAATCTTTGGCAGAACTGCCTAATTTGAAATTGCTTAATTTGAGGGGGAATAATCTCATAGGCTCAATTCCCAAGGCTCTGAGGGAGAAGTCAACTACTGATTTAGCTTTGAATTTGGATGGAAATCCTGGTCTCTGCCGGGTAGGCTCTTGCAAAACCAATACAAAAAAGTTCGCAAAACCACTTATTGCATCCGTGGCTTCTGTAGCGGGTCTTGCAATAATAGCCTGCATTTTTTGGATGCTCTACAAACATAAAAGAATAAAGAAAGTGTTATTGTCATCCAAGAAAGATGATCAGATTAAATCAAAGAATCAAGGATTTTCTCAAGCTGAAATCCGCAGGATTACCAATGAGTTGGAAACTGAAGTTGGAGAAGGGGGGTTTGGAAAGGTGTACCTTGGAAGGCTAAAAGATGGGACACAAGTTGCAGTCAAGTTACTTTCTAAGTCATCACAGCAAGGGGTTAATGAGTTTCAATCAGAGGCAAAACTGTTGTCCTTTATATATCATAAAAATCTTGTTTCTCTTGTTGGCTATTGTGATGATGGTGACATGAGAGCACTTATTTATGAATACATGGCAAAGGGAAATCTCCGCAACTTACTTTCAGATAAGAACCCAGATATTTTGGAGTGGAACGAGAGACTTCAAATTGCATTGGATGCAGCATATGGATTGGACTATCTACATAATGGTTGTAGGCCACCAATAATTCACAGAGACCTAAAATCTTCCAACATTTTGTTAAATGAAAACATGCAAGCCAAGATTGCTGATTTCGGATTATCTAAAGCTTTTGCCAACGACACTGACACTCATATTTCAACTCGTCCAGCTGGCACATTTGGCTACCTTGACCCTGAGTTCCATAGATCTGGAAACTTGAACAAAAGAAGTGATATTTATAGTTTTGGGATAATTCTACTTGAGTTATTGACTGGTCAGCGAGCAATAACCGTAACTTCTGAAGGCACAAGTCATATATCTGATTGGGTGAATCCAAAGCTTGAGACTGGGGATATCCAATCCATTGTGGATCCGAGATTAGAAGGAAAATTCAGTTCTGCTTCGGCGTGGAAGTTTCTAGAGATAGCCATGTCTTGCATTACACTAACAGGAATTAAAAGACCTGATATAAGTTCTGTTGTGATTGATTTAAAGCAATGTTTGGCTATGGAAACATCCCTTCTTGAAAGTGGAGAAAGCAGCAGTTTAATCTCAAGCACTACGTTGGAAACAAGTTATTCTCAGTCTGGATCATACTCACCTCCTTGTGCTAGTCACCACCGTCTTAAGGGAATATTGGAAATATATGTAACCGCCTTCCCAACTCGTCAATTTCTCACTCCTAGCCTCGCCTCGCCTTGCTGTGCCGTCGTGGCGGCATCTCCGTTCAATTTTAGCGTCTCCTTCCACTCACCACTCTCCGTCATATCTCTCAGTCTCAAAAGTTTTAAAGTTGCTGATGTCATCCCTCGATCATTTGAAAAGAAAAGTAACTCAAATGTCACTCTTTGTGCAGAATCTTCACAAAATACAGATGCTGCATTAGCTAAGGAGAATACAGATGAGAATAGGGATAGTGAGACAAATGGTGCAAATTTGGTGGTTGGTGATTCCATGCCGAAGACAAGAAACCTCCAAGATGTAGTGACTTCTCTTGCTCATATGGCTTATGTTGATCAGTTAGAGCACAAGAAAGGCTCTCTCACACAGATTCTCAAAAGACTTGTTAGTTAG 3147 0.3918 MEIVPLWILASIVSLSSIIDLPKSAQVVASDVNTDSDREISIDCGVTQENQDTNGFHHEPDNAEFVETGEIYNISFNNHTFDYSQEQVGEQMRTLRSFPEGKRNCYTLKPKQGKNNNYLIRAYFAYENYDNKSSLPYFHLYLGVNFWAEIKFYNASAIRRKTVAQVSSTNYIDVCLINVGKGIPFISLLELWPLSYSIYRATSSLLPLGLMTCVNLGMSEDFQFIRYADDIYGRSWFNGQMDNSEKLSTSEAIDSDVKDYRLPNEVLRAAVKALNVSSSLYINLKMINFTEDSEHYVYLHFFDFEDHSRGQVRSMEITFTDAIREIVTLKYQDVYTLVKRIPKGVPINRISITSTPGSSLPPMINAYEIYRALPQTNTPTHEEDVDAMRDIKHAYNNIVRISWQGDPCIPKEYRWEGVTCNYSDSIPRVTSLNLSSSKLTGPIVTSFSKLMTLEVLDLSNNQLRGEIPESLAELPNLKLLNLRGNNLIGSIPKALREKSTTDLALNLDGNPGLCRVGSCKTNTKKFAKPLIASVASVAGLAIIACIFWMLYKHKRIKKVLLSSKKDDQIKSKNQGFSQAEIRRITNELETEVGEGGFGKVYLGRLKDGTQVAVKLLSKSSQQGVNEFQSEAKLLSFIYHKNLVSLVGYCDDGDMRALIYEYMAKGNLRNLLSDKNPDILEWNERLQIALDAAYGLDYLHNGCRPPIIHRDLKSSNILLNENMQAKIADFGLSKAFANDTDTHISTRPAGTFGYLDPEFHRSGNLNKRSDIYSFGIILLELLTGQRAITVTSEGTSHISDWVNPKLETGDIQSIVDPRLEGKFSSASAWKFLEIAMSCITLTGIKRPDISSVVIDLKQCLAMETSLLESGESSSLISSTTLETSYSQSGSYSPPCASHHRLKGILEIYVTAFPTRQFLTPSLASPCCAVVAASPFNFSVSFHSPLSVISLSLKSFKVADVIPRSFEKKSNSNVTLCAESSQNTDAALAKENTDENRDSETNGANLVVGDSMPKTRNLQDVVTSLAHMAYVDQLEHKKGSLTQILKRLVS 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1315 1048 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 662 867 - -
Mibi11g1315 1048 Gene3D Ribonuclease Inhibitor 385 511 IPR032675 -
Mibi11g1315 1048 PANTHER OS07G0107800 PROTEIN-RELATED 40 864 - -
Mibi11g1315 1048 Pfam Leucine rich repeat 427 487 IPR001611 GO:0005515
Mibi11g1315 1048 FunFam receptor-like protein kinase FERONIA 552 661 - -
Mibi11g1315 1048 FunFam Leucine-rich repeat receptor-like kinase 383 516 - -
Mibi11g1315 1048 Pfam Malectin-like domain 42 371 IPR024788 -
Mibi11g1315 1048 Gene3D Phosphorylase Kinase; domain 1 592 662 - -
Mibi11g1315 1048 SUPERFAMILY L domain-like 380 496 - -
Mibi11g1315 1048 ProSitePatterns Protein kinases ATP-binding region signature. 592 614 IPR017441 GO:0005524
Mibi11g1315 1048 SUPERFAMILY Protein kinase-like (PK-like) 574 855 IPR011009 -
Mibi11g1315 1048 CDD STKc_IRAK 592 857 - -
Mibi11g1315 1048 ProSiteProfiles Leucine-rich repeat profile. 452 475 IPR001611 GO:0005515
Mibi11g1315 1048 ProSiteProfiles Protein kinase domain profile. 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1315 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Mibi11g1315 1048 SMART serkin_6 586 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1315 1048 MobiDBLite consensus disorder prediction 983 1009 - -
Mibi11g1315 1048 Pfam Protein tyrosine and serine/threonine kinase 588 849 IPR001245 GO:0004672|GO:0006468
Mibi11g1315 1048 Gene3D Transferase(Phosphotransferase) domain 1 663 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1315 Mibi-ChrMibi11 31557850 31570849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1315 40 872 Receptor kinase-like Gene Family AT2G19210 41.032 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g1315 Malectin_like 4.4e-72 CL0202