Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1311 ATGATTTGTATTATTATAGTGGATGCTATCTTGAACATCAAAATCACATACAAAATCTCCAAATTGGATTGGCAAGGTGATCCATGTTTTCCCAATTATGCATGGGAGGGACTTATTTGCAGTTCTGGCACCATTCACTCTCACGCAAGGATTACCTCATTAGACTTGAGCCAGAGTAAGTTAACAGGACAGATCGCTACTTCCTTCTCACAGCTAACGGAGTTAGAGTCCCTGGATTTGTCAGATAATAACTTATCAGGAACACTACCAGAATTTCTAGCTGAATTACCAAAGTTGAAAGTCCTTGATTTGAGAGGCAACAAGCTCACCGGTCTAATTCCCAATATTTTCAAGGAAAAGTCAGATTTGGAAATGAGTTTGGATGGTAACCCCGATATTTGCTGGACGGATCCATGCAAAAAGCATAAGTTTGTTATTCCACTAATAGCCTCTGTTTCTGCTTTGATTGTTGTGACATTGGTTTCTCTCGGAATATGGATCATTATAATTAAAAGACTGAAAGGTTTGCACAAGATTCCCTATAAAGTTTCTTCTTTCTTATGTCTTAGTAACAACAAGTATGCTTTAAAATGGACAAACAGGCTTCGAGTTGCACTAGATGCCGCATGTGTTGGTTACCTTGATCCTGAGTTTCAAAGCTCTGGTAACCTCACAAAAGGAAGTGATATATTTAGTTTTGGAATCATTCTGCTAGAGCTAATCACTGGACATCCAGCAGCTAAAAGGCAACCAAACTATACCTTCACTCTCCTTCTTCATTGGGTTGTCCCTAAAACAAGCATGGAAGTGACCAGCGATCTCCACCCTAATTCAAGCAGTATGCGATTTGATTCAAACCTCAGTATACTATCTGGAAGATAG 882 0.3923 MICIIIVDAILNIKITYKISKLDWQGDPCFPNYAWEGLICSSGTIHSHARITSLDLSQSKLTGQIATSFSQLTELESLDLSDNNLSGTLPEFLAELPKLKVLDLRGNKLTGLIPNIFKEKSDLEMSLDGNPDICWTDPCKKHKFVIPLIASVSALIVVTLVSLGIWIIIIKRLKGLHKIPYKVSSFLCLSNNKYALKWTNRLRVALDAACVGYLDPEFQSSGNLTKGSDIFSFGIILLELITGHPAAKRQPNYTFTLLLHWVVPKTSMEVTSDLHPNSSSMRFDSNLSILSGR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1311 293 SMART LRR_typ_2 96 119 IPR003591 -
Mibi11g1311 293 SMART LRR_typ_2 72 95 IPR003591 -
Mibi11g1311 293 Pfam Leucine rich repeat 50 109 IPR001611 GO:0005515
Mibi11g1311 293 SUPERFAMILY Protein kinase-like (PK-like) 210 263 IPR011009 -
Mibi11g1311 293 Gene3D Transferase(Phosphotransferase) domain 1 208 288 - -
Mibi11g1311 293 SUPERFAMILY L domain-like 45 136 - -
Mibi11g1311 293 Gene3D Ribonuclease Inhibitor 9 136 IPR032675 -
Mibi11g1311 293 FunFam Leucine-rich repeat receptor-like kinase 5 136 - -
Mibi11g1311 293 PANTHER OS07G0107800 PROTEIN-RELATED 211 264 - -
Mibi11g1311 293 PRINTS Leucine-rich repeat signature 75 88 - -
Mibi11g1311 293 PRINTS Leucine-rich repeat signature 96 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1311 Mibi-ChrMibi11 31363160 31368157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1311 205 245 Receptor kinase-like Gene Family AT1G07560 46.341 4.91e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi11g1311 LRR_8 3.3e-11 CL0022