Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1305 ATGATCTGTATTATTATAGTGGATGCTATCTTGAACATCAAAATCACATACAAAATCTCCAAATTGGATTGGCAAGGTGATCCATGTTTTCCCAATTATGCATGGGAGGGACTTACTTGCAGTTCTGGCACCGTTCTTTCTCACGCAAGGATCACTTCATTAAACTTGAGCCTGAGCAAGTTAACAGGACACATCGCTAGTTCATTCTCACAGCTTACGGAGTTAGAGTCCCTGGATTTGTCAGATAATAACTTATCAGGAACACTACCAGAATTTATAGCTGAATTACCAAAGTTGAAAGTCCTTGATTTGAGAGGCAACAAGCTCACTGGTCCAATTCCCAATATTTTCAAGGAAAAGTCAGATTTGGAAATGAGTTTGGACGGTAACCGTGATCTTTGCTGGACGGATCCATGCAAAAAGCATAAGTTTGTTTTTCCACTAATAGCCTCTGTTTCTGCTTTGATTGTCGTGATCTTGGTTTCTCTCGGAATATGGATCATTATAATTAAAAGACGGAAAGGTTTGCACAAGATTACCTATGAAGTTTTTGGTTTCTTATGTCTTAGTAACAACTGGTATGCTTTGAAATGGACGAACATGCTTCGAATTGCACTAGATGCCTCGTGTGTTGGTTACCTTGATCCTGAGTTTCAAAGCTCTGGCAACCTCACAAAAGGAAGTGATATATTTAGTTTTGGAATCATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCTAAAAGGCAACCAAACTATACCTTCACTCTCCTTCTTCATTGGGTTGCTCCTAAAACAAGTATGGATGTGACCAGCGATTTCCACCCTAATTCAAGCAGTTCCACGAATATGAGTGCTATGCAATTTGATTCAGACCTTAGTATACTGTCTGGAAGATAG 900 0.3967 MICIIIVDAILNIKITYKISKLDWQGDPCFPNYAWEGLTCSSGTVLSHARITSLNLSLSKLTGHIASSFSQLTELESLDLSDNNLSGTLPEFIAELPKLKVLDLRGNKLTGPIPNIFKEKSDLEMSLDGNRDLCWTDPCKKHKFVFPLIASVSALIVVILVSLGIWIIIIKRRKGLHKITYEVFGFLCLSNNWYALKWTNMLRIALDASCVGYLDPEFQSSGNLTKGSDIFSFGIILLELITGQPAAKRQPNYTFTLLLHWVAPKTSMDVTSDFHPNSSSSTNMSAMQFDSDLSILSGR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1305 299 Gene3D Ribonuclease Inhibitor 9 135 IPR032675 -
Mibi11g1305 299 Gene3D Transferase(Phosphotransferase) domain 1 188 291 - -
Mibi11g1305 299 SUPERFAMILY Protein kinase-like (PK-like) 209 261 IPR011009 -
Mibi11g1305 299 Pfam Leucine rich repeat 50 109 IPR001611 GO:0005515
Mibi11g1305 299 PRINTS Leucine-rich repeat signature 96 109 - -
Mibi11g1305 299 PRINTS Leucine-rich repeat signature 75 88 - -
Mibi11g1305 299 SUPERFAMILY L domain-like 31 124 - -
Mibi11g1305 299 FunFam Leucine-rich repeat receptor-like kinase 5 153 - -
Mibi11g1305 299 PANTHER OS07G0107800 PROTEIN-RELATED 208 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1305 Mibi-ChrMibi11 30950594 30956416 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1305 8 174 Receptor kinase-like Gene Family AT1G05700 47.701 3.52e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g1305 LRR_8 1.4e-10 CL0022