Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1298 ATGGGTAAAGCTTCTAGGTGGTTGAAGGGATTGCTGGGGATGAAGAAAGAGAAGGATCAACGAATCAACATAGAAAATTCTGGTTCCTTAGTTTCTGACAAGAAGGAAAAGAAAAGATGGAGTTTCACAAAGTCAGCTGGCAAAGATTCTTCTGGATCCAATGGTCAACCTCGTTTCCAACCTCAAGATTCCCCTTGGTATAGATCCTACAACATGTCTGAAACTGAGAAGGAACAGAACAAGCACGCAATTGCCGTCGCCGCAGCAACAGCCGCCGCTGCTGATGCCGCCGTCGCCGCCGCTCAGGCCGCCGTCGCGGTGGTCAGACTCACAAGCCATGGCAGAGGAACTTTGTTCACTGGAAGCAGAGAGAAATGGGCGGCAGTTAAGATTCAAACCGTTTTCAGAGGATATTTGGCGAGGAAGGCTTTGAGAGCATTGAAAGGATTGGTGAAGATTCAAGCACTTGTACGAGGTTTCCTTGTTAGAAAGCGAGCTGCTCAAACTCTCCATAGCATGCAAGCTTTAATCAGAGCTCAAACTTCGGTTCGATCTCAGAGAGCTCGTCGTTCCATCAGCAAACAAAATCAAGCTAGAAAATCAATGGATCGAGTTGATGAAATCCACAGCAAAAGATTATCAACTACCTATGAACAATCCTTCAATGGGTATGATGAAAGTCCCAAAATTGTTGAGATTGATACATACAGAACACAATCAAGATCTCGGAGAATTATAACGGCGTTTTCAGAATGTGGGGACGAAACGCCTTATCAGACGACGCCGTTTCCTGACGTTAAGGATTTCGAGTGGTGCTTTAACGGCGACGAGTGCAAATTCTCGACAGCTCAGAGCACACCACGGTTTGTGAACAGCGTGCGTGCACACAACGCGCCGCCGACCCCTGCGAAGAGTGTTTGTGGGGAGGCCTTTTGCCGGGGGTATTATGGTAATTTCCCGAGCTACATGGCCAATACGATGTCGTTTAGGGCCAAGGTGAGGTCTCAGAGTGCACCAAAGCAGAGGCCAGAGCCAAAGAAGAGGCTTTCATTGAATGAGATAATGGCTGCGAGGAATAGTATAAGTAGTGTTAGAATGCAGAGATCTTCTTGTTCACAAGTTCATGAAGAAGGAGAGAATTGGAATTTCCGAGTTTGA 1158 0.4689 MGKASRWLKGLLGMKKEKDQRINIENSGSLVSDKKEKKRWSFTKSAGKDSSGSNGQPRFQPQDSPWYRSYNMSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFTGSREKWAAVKIQTVFRGYLARKALRALKGLVKIQALVRGFLVRKRAAQTLHSMQALIRAQTSVRSQRARRSISKQNQARKSMDRVDEIHSKRLSTTYEQSFNGYDESPKIVEIDTYRTQSRSRRIITAFSECGDETPYQTTPFPDVKDFEWCFNGDECKFSTAQSTPRFVNSVRAHNAPPTPAKSVCGEAFCRGYYGNFPSYMANTMSFRAKVRSQSAPKQRPEPKKRLSLNEIMAARNSISSVRMQRSSCSQVHEEGENWNFRV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1298 385 PANTHER IQ-DOMAIN 5-RELATED 1 352 - -
Mibi11g1298 385 Pfam IQ calmodulin-binding motif 151 165 IPR000048 GO:0005515
Mibi11g1298 385 Pfam IQ calmodulin-binding motif 126 145 IPR000048 GO:0005515
Mibi11g1298 385 MobiDBLite consensus disorder prediction 45 67 - -
Mibi11g1298 385 ProSiteProfiles IQ motif profile. 172 201 IPR000048 GO:0005515
Mibi11g1298 385 MobiDBLite consensus disorder prediction 30 44 - -
Mibi11g1298 385 Pfam Protein of unknown function (DUF4005) 287 368 IPR025064 -
Mibi11g1298 385 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Mibi11g1298 385 Gene3D - 66 149 - -
Mibi11g1298 385 SMART iq_5 123 145 IPR000048 GO:0005515
Mibi11g1298 385 SMART iq_5 146 167 IPR000048 GO:0005515
Mibi11g1298 385 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Mibi11g1298 385 MobiDBLite consensus disorder prediction 186 205 - -
Mibi11g1298 385 MobiDBLite consensus disorder prediction 18 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1298 Mibi-ChrMibi11 30791466 30793187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1298 1 380 IQD Protein Family AT3G16490 57.213 4.71e-120 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1298 11 30791466 30793187 Mibi11g1298 11 30791466 30793187 ECH