Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1295 ATGAATGGTAGGTTAGGAAACGAGGAGGTTTCACCTCAGCTTTTGGATTTGATCTCAAAAGACAGAGAATGGCATGAAAACAGAGAGCACAAGTTTTCAGAAGAGAGGAAACTTGAGCTCAGACTTGGTCCACCTGGTGAAGAAGAAGAAGAATCTCTACTTTCTCTTGGTTACTTCTCAGCCTCCATTAATGGAAGAAGCCAAACTCAGAAAACTGTGTCTTCTTCTCCTTGGGTTTCTTCTGAGAAGATGAAGACCATGATGGCTCAGAAGAACATTAATCAACAACACAAAGGGGTCTATGTTTCATCATCATCATCATCATTCCTACAGCCTCAACCCTCTCCTGCAAATACAGCTGTACCCAACACTTCTCAGAAAAGAACTGCTCCTGGTCCAGTAGTGGGGTGGCCTCCAATTCGATCATTTAGGAAGAACCTTGCAAGTAGTAGCAATTCTAAGGTTGTTCCTCCTCAACATGAAACTCAGAATCAGCAGCATGTGGTTGTTGAGGATAAGGTTGCTGGGAAGAAATCTGTGGCTGACAACAATAACGTTGTTGGTGGTAATAAAGGCCTGTTTGTAAAGATTAATATGGATGGAGTTCCTATAGGAAGAAAAGTGGACCTTAATGCTTATGATAACTATGAAAAACTCTCCTCTGCTGTTGATGAACTCTTTAGAGGCCTCCTTGCTGCTCAAAGAGATTCCTGTGGTGTTGGTGGTGGTGGGATTCAGAAGAAGCAAGAGGAAGAGAAAGCCTTCACAGGTTTATTGGACGGGAGTGGAGAATACACTTTGGTTTATGAAGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTTCCATGGCACATGTTCGTGTCAACAGTGAAGAGGCTGCGTGTACTGAAGAGTTCTGAGCTCTCTGCTTTTACTCGTGGAAATAAGCAAGACAAAAATACCATGGCTGTTTGA 957 0.4305 MNGRLGNEEVSPQLLDLISKDREWHENREHKFSEERKLELRLGPPGEEEEESLLSLGYFSASINGRSQTQKTVSSSPWVSSEKMKTMMAQKNINQQHKGVYVSSSSSSFLQPQPSPANTAVPNTSQKRTAPGPVVGWPPIRSFRKNLASSSNSKVVPPQHETQNQQHVVVEDKVAGKKSVADNNNVVGGNKGLFVKINMDGVPIGRKVDLNAYDNYEKLSSAVDELFRGLLAAQRDSCGVGGGGIQKKQEEEKAFTGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTRGNKQDKNTMAV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1295 318 ProSiteProfiles PB1 domain profile. 192 299 IPR000270 GO:0005515
Mibi11g1295 318 MobiDBLite consensus disorder prediction 105 130 - -
Mibi11g1295 318 FunFam Auxin-responsive protein 188 311 - -
Mibi11g1295 318 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 302 IPR003311 GO:0005634|GO:0006355
Mibi11g1295 318 Pfam AUX/IAA family 38 304 IPR033389 -
Mibi11g1295 318 MobiDBLite consensus disorder prediction 105 138 - -
Mibi11g1295 318 Gene3D - 187 310 - -
Mibi11g1295 318 SUPERFAMILY CAD & PB1 domains 190 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1295 Mibi-ChrMibi11 30763818 30767317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1295 195 310 B3 DNA Binding Superfamily AT4G23980 32.759 5.69e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi11g1295 AUX_IAA 1.4e-70 CL0072