Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1294 ATGGATTTTTTCTGGAGGCCTCACTTGAATTTGCTTCACTTTCTTCTCTTCCTTCTTCACCTTCACTCCTTTTCTTCCTATACCACACCCTTGGATTGTAAGGACACATCACGTGTCTGCACTTCTTTCATAGCCTTTAAACCTCAACAAAATCAAACCTTAGCCATAATTCAGAGCATGTTTGATGTATTGCCTGCAGATATTACTGTTGAAGGAAACGGCCCAAACTACTTATTTATCAGAAAGAACTGTTCTTGTGCTTCTGGTACAAACAAATACGTATCTGGTACTACTTATACTGTAAAATCCAATGAAGGGTTGGTTTTTGATTTGGTGATGAAGGCCTATGATGGGCTTGGTTTCTTGCCCAAAACGACCAAGAGGGCAGAAAACGGCGCTGTTATAACATTGAAATTGTTTTGTGGTTGTTCTAGTGGACCATGGAATTATATGATGAGTTATGTGATGAGAGAAAGTGATAGTATTGCATCTCTTGCGAGTAGGTTTGGAGTTAGTATGGATAGTATCGAGACTGTTAATGGAATCAACAATCCTGATAATATCACTGTTGGATCCTTGTATTATATACCTCTTAATTCAGTTCCTGGTGAGCCATATACCCAGAAGAATGATACTTCTACTGCAGCTCCTATTCCTGCCCCATCTATTGACAATTTTTCTGTTAGTCAAGTGAGTCATGCTCATGCGCCCTATGTATGGATTGTTGGGGGTTTAGGGGTTGGTCTTCTCTTGATAATATTAAGTGTGGTTCTCTATTTCTGTGTGAGATCGTCCAAATGTTGTGCTGAAGCAAGGACAAGTCATGAAAAAGAAGATGAAGGCAAGATCTCTCACAAATTTCATATCCTTCAAAATCCAAGTTTTTGCTGTGGTTCAGGAAGGTACATACAGGGCAAACCTGTAGAACAGAGACAACCTGATCTTGAATCCACAAACAACCAGAATCTTGCTCCAAAAGTTTCAACTTTGGGGATTAGTGCCTTTGGAGTGGAGAACCCTTTTGTTTTCACATATGAAGAGATTTTTTCTGCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGTATTTATGGTTCTGTTTTTTATGGCTTCCTTCGTGACCAGGATGTTGCCATCAAAAGAATGACTGCTACAAAAACTAAAGAATTCTTGTCAGAAATGAAGGTCCTGTGCAAAGTTCATCATGCAAATCTGGTTGAATTGATTGGCTATGCTACTAGTCATGATGAGCTTTTTCTTATTTATGAATATGCCCAGAAGGGTTCACTAGGAGGCCATTTGCATGATCCACTGACAAAGGGTTCTTCCTCACTCTCTTGGATCATAAGGGTCCAGATAGCACTTGATGCTGCTAGGGGCGTTGAGTATATACATGAACACACCAGAACCAATTATGTCCATAGGGATATCAAGACGAGCAACATCTTACTTGATGCTTCCTTTAGAGCAAAAATTTCGGATTTTGGGTTAGCGAAACTTGTTGGAAAAGCAAATGAAGAAGAAATTCATGCCACCAAAGTTGTTGGCACATATGGTTATCTTGCACCAGAATACTTGAGTAATGGCCGTGCAACAACCAAAAGTGATGTCTATGCATTTGGTATTGTTCTTTTTGAGATAATATCAGGGAAGGAAGCCACTTTCCGGACAGAAGGCATAATGTCAAAAAACCCCGAGAGACGTTCTCTTGCATCTATTATGTTGGCAGCTCTTGGGAACTCACCTGATTCAATGAGTATGTCTGGTTTGAGAAATCATATTGATCCTAATATGATGGACTTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGAAGATCCCGTCATAAGACCTGATATGAAACAAGTTGTGATTTCGCTCTCACAGATCCTCCTGTCTTCTATTGAGTGGGAATCAACTCTAGCGGGGAATAGTCAAGTATTTAGTGGGCTTGTTCAAGGAAGATAA 1998 0.3999 MDFFWRPHLNLLHFLLFLLHLHSFSSYTTPLDCKDTSRVCTSFIAFKPQQNQTLAIIQSMFDVLPADITVEGNGPNYLFIRKNCSCASGTNKYVSGTTYTVKSNEGLVFDLVMKAYDGLGFLPKTTKRAENGAVITLKLFCGCSSGPWNYMMSYVMRESDSIASLASRFGVSMDSIETVNGINNPDNITVGSLYYIPLNSVPGEPYTQKNDTSTAAPIPAPSIDNFSVSQVSHAHAPYVWIVGGLGVGLLLIILSVVLYFCVRSSKCCAEARTSHEKEDEGKISHKFHILQNPSFCCGSGRYIQGKPVEQRQPDLESTNNQNLAPKVSTLGISAFGVENPFVFTYEEIFSATDGFSDSNLLGHGIYGSVFYGFLRDQDVAIKRMTATKTKEFLSEMKVLCKVHHANLVELIGYATSHDELFLIYEYAQKGSLGGHLHDPLTKGSSSLSWIIRVQIALDAARGVEYIHEHTRTNYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEEEIHATKVVGTYGYLAPEYLSNGRATTKSDVYAFGIVLFEIISGKEATFRTEGIMSKNPERRSLASIMLAALGNSPDSMSMSGLRNHIDPNMMDLYPHDCVFKMAMLAKQCVDEDPVIRPDMKQVVISLSQILLSSIEWESTLAGNSQVFSGLVQGR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1294 665 Pfam Protein tyrosine and serine/threonine kinase 359 635 IPR001245 GO:0004672|GO:0006468
Mibi11g1294 665 SUPERFAMILY LysM domain 152 197 IPR036779 -
Mibi11g1294 665 Gene3D Phosphorylase Kinase; domain 1 332 426 - -
Mibi11g1294 665 FunFam PTI1-like tyrosine-protein kinase 3 427 651 - -
Mibi11g1294 665 SMART LysM_2 153 197 IPR018392 -
Mibi11g1294 665 CDD LysM 153 196 IPR018392 -
Mibi11g1294 665 Pfam LysM domain 154 192 IPR018392 -
Mibi11g1294 665 Gene3D LysM domain 148 207 IPR036779 -
Mibi11g1294 665 SUPERFAMILY Protein kinase-like (PK-like) 333 637 IPR011009 -
Mibi11g1294 665 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Mibi11g1294 665 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Mibi11g1294 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Mibi11g1294 665 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1294 665 SMART serkin_6 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1294 665 Gene3D Transferase(Phosphotransferase) domain 1 428 652 - -
Mibi11g1294 665 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 18 659 IPR044812 GO:0019199|GO:0045087
Mibi11g1294 665 FunFam Kinase family protein 331 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1294 Mibi-ChrMibi11 30719634 30723806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1294 30 665 Receptor kinase-like Gene Family AT1G51940 64.341 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi11g1294 PK_Tyr_Ser-Thr 2.6e-49 CL0016