Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1291 ATGTTAAAAAAAAATTCCTCAAAATCCATTTCCTTCTTCTCTGATCGATCGCCGCCGAGGATGACTCGGCGGTGCTCTCACTGTAGCCATAATGGCCACAATTCCCGAACTTGCCCTTCACGTGGTGGTGTGAAGCTTTTTGGTGTTAGACTCACAGATGGGTCGATTATTAAGAAGAGTGCGAGTATGGGAAATCTCTCTGCTCATTACTATTCTTCTTCTTCCGCCGCTGGATCACCCAATCATCCTGAGTCTCCTTGTTCTCATGACTTGGGTAATGACCAAGATGGGTATTTGTCTGATGATCCTTCTCATGCTTCTAGTTCTGTTAATCGCCGTGGAGATAGAAAGAAAGGCACTCCATGGACTCAAGAAGAGCATAAGATGTTTCTAATTGGTCTCCAGAAGCTTGGTAAAGGAGATTGGCGAGGAATATCTCGCAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGTAATGCTCCCCGGAAAAAGAGACGTGCCAGTCTTTTTGACATGGTTCCAGATGTGGCTTCAGATCCACCTCCGGTGCCGGAAGAACAAGTATTGCTACCACCTTCTGAGAACGCACAACCTGGTAGTGCATATTTACAACCATCATTAGATCTCTCCCTCAAGTCAGAATTTGAACCCATGGAGACTAATTATGAAGAAAATGTGGATGAGCCCAATGAAACTATGGTAAGATCAAGTGGATCGGCACCAGCGGCTAATGGATTCATGCCAACATATGTACCTGTTGCGTTTTCCTTGTGGCCATCAAATGCAGCTCCCTTTGAAGAAGTTAAGGAAGCTGAGATAGCTCATCATCAGGTTCTTAAGCCAATCCCAATGGTTCCAAAGGAACCAGTCAATGTTGATGAACTTGTTGGCATGTCTCAGCTGAGTTTGGGTGAAACACAAAAAAGTGAAGGGGAGCCTTCCCCACTTTCTTTGAAGTTGCTGGGGGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCTCGAGTTGGTGGTTCAGATTTAAACAATGGCAAGAACAGTGCAATTCAAGCAGCTTAA 1095 0.4502 MLKKNSSKSISFFSDRSPPRMTRRCSHCSHNGHNSRTCPSRGGVKLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNHPESPCSHDLGNDQDGYLSDDPSHASSSVNRRGDRKKGTPWTQEEHKMFLIGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNAPRKKRRASLFDMVPDVASDPPPVPEEQVLLPPSENAQPGSAYLQPSLDLSLKSEFEPMETNYEENVDEPNETMVRSSGSAPAANGFMPTYVPVAFSLWPSNAAPFEEVKEAEIAHHQVLKPIPMVPKEPVNVDELVGMSQLSLGETQKSEGEPSPLSLKLLGEPSRQSAFHANARVGGSDLNNGKNSAIQAA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1291 364 MobiDBLite consensus disorder prediction 108 124 - -
Mibi11g1291 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 169 IPR006447 GO:0003677
Mibi11g1291 364 PANTHER TRANSCRIPTION FACTOR KUA1 23 296 - -
Mibi11g1291 364 Gene3D - 120 171 - -
Mibi11g1291 364 FunFam transcription factor MYB1R1 120 171 - -
Mibi11g1291 364 SUPERFAMILY Homeodomain-like 116 171 IPR009057 -
Mibi11g1291 364 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Mibi11g1291 364 SMART sant 118 168 IPR001005 -
Mibi11g1291 364 MobiDBLite consensus disorder prediction 71 88 - -
Mibi11g1291 364 CDD SANT 121 166 IPR001005 -
Mibi11g1291 364 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Mibi11g1291 364 MobiDBLite consensus disorder prediction 71 124 - -
Mibi11g1291 364 MobiDBLite consensus disorder prediction 1 16 - -
Mibi11g1291 364 MobiDBLite consensus disorder prediction 316 364 - -
Mibi11g1291 364 MobiDBLite consensus disorder prediction 1 43 - -
Mibi11g1291 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 170 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1291 Mibi-ChrMibi11 30662187 30668167 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi11g1291 Myb_DNA-binding 4.7e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1291 11 30662187 30668167 Mibi11g1291 11 30662187 30668167 ECH