Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1276 ATGACACCACTCCTCACTCATTCTGCTTCCTCTGAAACTTCCTCTTCTTCTTCCTCCTCTTCTGATTCCAAATCCCAAACACAACATACCACCACCACCACCAGGCCCACCAAAAGACCTAAACTTTCTCCTTCTTCATCTTCATCATCATCATCATCATCATCATCATCATCATCATCATCTTCTTCCATTAATGGCAATAATAAGCTGCCAAGCTACCATGGAGTGAGAATGAGAAGCTGGGGGAAATGGGTGTCGGAAATCCGGGAGCCACGCAAGAAATCCCGCATCTGGCTTGGCACCTTCGCCACCGCAGAAATGGCCGCCAGGGCCCACGACGTCGCCGCCCTCTCCATCAAGGGCAAATCCGCCATCCTCAATTTCCCCCACATCGCCTCCCTCCTCCCCAAACCCCCCACGTGCTCCCCACGTGACATCCAAGCCGCCGCCTCCTCCGCCGCCTCCATGCTCAACCTCGACCACCACCACCCCACCACGACCACAGCCCGGTCCGAGTCCACCGAGTCAACCGAGTCGGCCGAGTCAACCGAGTTAAGTGAGATAGTGGAGCTGCCTAGTATAGAAGAAGAGAGCCTCCACTCGGCCGAGTCATTGACCGAGTTCCTATGGGTTGACTCAGTGGATAGTTGGATTAATTTTCCTGCTACGTGTTCCGATGATTCGGAATTATTGATGAGCTCCATTTTCAACCACCATTTCTCAGAGGAAATACCACTTTGGGATTAA 747 0.5261 MTPLLTHSASSETSSSSSSSSDSKSQTQHTTTTTRPTKRPKLSPSSSSSSSSSSSSSSSSSSSINGNNKLPSYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALSIKGKSAILNFPHIASLLPKPPTCSPRDIQAAASSAASMLNLDHHHPTTTTARSESTESTESAESTELSEIVELPSIEEESLHSAESLTEFLWVDSVDSWINFPATCSDDSELLMSSIFNHHFSEEIPLWD 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1276 248 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
Mibi11g1276 248 MobiDBLite consensus disorder prediction 1 72 - -
Mibi11g1276 248 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 Gene3D AP2/ERF domain 72 131 IPR036955 GO:0003700|GO:0006355
Mibi11g1276 248 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 49 200 - -
Mibi11g1276 248 FunFam Ethylene-responsive transcription factor 2 72 130 - -
Mibi11g1276 248 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mibi11g1276 248 MobiDBLite consensus disorder prediction 1 70 - -
Mibi11g1276 248 MobiDBLite consensus disorder prediction 163 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1276 Mibi-ChrMibi11 30450683 30451429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1276 56 240 AP2-EREBP Transcription Factor Family AT4G32800 47.321 1.68e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi11g1276 AP2 5.3e-13 CL0081