Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1253 ATGTCTAGCCTACTTGAACATGATTATATAGGCCTATCAGAGAAGCCTTCCATGGAAATCTATGAAAAGAGCTCACTTCTCAACTTGAACTTAAAGGAGACAGAGCTCAGACTTGGGCTTCCTGGTTCTGAGTCTCCAGAGAGAAAATCAACAAACGTTATATCTCTGTTTGGGAAGGATTTGAAGAACAGTACAAATGCTTTGAAGAACGTTGTTGCAGGATCTAAGAGAAGATTCTCTGATGATGAAGCCATTGCTGAGTTTGAAGGTAAAGAAACTAATACCCACAAGGCTTCTCAATCTGCAAAACCAAAACAGGATAAGAAGAATCTTGAGGTTTCTGAAACAGACGAACATGCTTGTCCTCTTTCTTCAAAGGCACTGGTTGTGGGGTGGCCACCAATTCGATCTTTTCGGAGGAACACGATGGCTTCTAGCTTGACAAAGAACAAGGAAGATGAAGATGAAGAAGAAGAAGCGGGGAAACATGAAGCAAGTGGTTGTCTTTATGTGAAAGTTAGTATGGATGGTGCTCCATATCTCAGAAAGGTTGATCTTAGAATGTACACAAACTATAGGCAACTTTCTTCTGCTCTTGAGCAAATGTTCACTTGCTTCACCATTGGTGAATGCAATTCTGGTGGGTTTCCTGGGAAAGATGATCTGAGTGATGAGAGGTCTTTGAAGGATCTTCTTCATGTGTGTGAGTATGTTGTTACATATGAAGACAAGGATGGAGATTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTCACTGAATCATGCAGGAGACTGAGGATCATGAAAGGTTCTGAAGCAATTGGTTTAGCTCCCAGGGCCATGGAAAAATGCAGGAGCCACAGCAACTGCAGAAGAATCAAATAG 888 0.4212 MSSLLEHDYIGLSEKPSMEIYEKSSLLNLNLKETELRLGLPGSESPERKSTNVISLFGKDLKNSTNALKNVVAGSKRRFSDDEAIAEFEGKETNTHKASQSAKPKQDKKNLEVSETDEHACPLSSKALVVGWPPIRSFRRNTMASSLTKNKEDEDEEEEAGKHEASGCLYVKVSMDGAPYLRKVDLRMYTNYRQLSSALEQMFTCFTIGECNSGGFPGKDDLSDERSLKDLLHVCEYVVTYEDKDGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRAMEKCRSHSNCRRIK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1253 295 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 29 276 IPR003311 GO:0005634|GO:0006355
Mibi11g1253 295 Pfam AUX/IAA family 33 280 IPR033389 -
Mibi11g1253 295 MobiDBLite consensus disorder prediction 88 117 - -
Mibi11g1253 295 MobiDBLite consensus disorder prediction 88 116 - -
Mibi11g1253 295 Gene3D - 162 283 - -
Mibi11g1253 295 ProSiteProfiles PB1 domain profile. 168 271 IPR000270 GO:0005515
Mibi11g1253 295 SUPERFAMILY CAD & PB1 domains 164 270 - -
Mibi11g1253 295 FunFam Auxin-responsive protein 163 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1253 Mibi-ChrMibi11 30211221 30212842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1253 162 274 B3 DNA Binding Superfamily AT2G46530 30.088 1.78e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi11g1253 AUX_IAA 2.7e-87 CL0072