Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1244 ATGAGCAGGCGGTTACTAAATTCATCTCTAATGACACTGCTTGTGGTGACTGAAAATTTAGACATTCAGATAAGATCAAATGGAAAGGGAACTAAAGTTGAATCTGATTTTAGGGCTGTGTCTCGTTTTCATCAAGCTTGCCTTTCATGTTGGCAGCACAGTGGGAGATGGGAGGAAACGCATCACTATGGACAAGAACCCTGAATTTCAGGATTTATAAGCATTGATTGTGGAGCAACACGTGATTACCTATATCAGGAAACTGGCATATGGTATGAGACAGACACAAACTATGTAGAAACCGGTACAAGTTCTGTGGTTAGCCTAAACGTCAACCTCGACTATCCATATTTTGGGGGACTTCTAAACACATTGAGGAGCTTTCCAGACGGAAAAAAGAATTGCTACACTCTCAAACCAAAACAAGGAAAGGACCATACTTACCTAATTAGAGCTTACTTTGCATATGGAAATTATGACGCCAATAATCAAACTCCAATCTTTGACTTGTACCTTGGAGTCAATCGCTGGGACACTGTTGATTTGGGAAATAATTATTATCGCATGGTTGAGATTATTCACACTCCCACAACCGACATAATATATGTGTGCCTTGTGAAAACTATTTTGGGAGTACCATTCATTTCTGCATTGGAGCTTCGACCTCTTGATAATTCTATCTACCAAACTCCATCGCCTTCTCAATCACTTTTAATCAATCAAGGGACATTTGATATTGCCTCCACCAGTTCCGCCGCACACAGCAGGTATGAGGACGATATCTATGATCGACTGTGGCGCAAAATGAATGTATCAAATTGGTATCAGATTAATGGGTCTGTAGATATTGATCATTCAAGCACAAACGATTCTTACAAGTTACCCTCTGAAGTGCTGAAATCTGCGGCCCAATCATCGAATCTCTCCTATGCATTAAGCTTTGATTATGACTCTATATGGAAAGACCTCGACAGGTCTTCAGAATATTACGTCTATTTTCACTTTTGTGAAATTCAGCCACTTCCCCCACGGCAAAAAAGAATACTGAATATTACTATTGGTGGTGATGGAAACTTTTTCTCCCAACAACCTATAATTCTTGAATACTTGAAACCGCAAACCATTGTTTCCCAAAATGCAAGTCATGGTTATGTTCGTTTTAGCATCAGCGCAACATCAGAATCCTATGCTCCTCCAATCCTAAATGCTTTTGAGGACATTAAAGATACATACAAGATCAACAATTCAGATTGGCAGGGAGACCCATGTGTTCCAAAACTTGCTTGGGATGGACTAAGCTGCAGTTCTGGTTTCAATGGCACCAACTCGAGGATCAGCTCTATGAACCTAAGCGCGACCAAATTGACAGGGAAAATAACTACCTCATTTTCAAAACTTACAGAGTTAGAATCACTAGATTTATCATTCAATGACTTGTCAGGTTCGATACCAGAATTTCTGGCTGAATTGCCGAAGTTGAGACTTCTTAATTTGAGTGGCAACAAGCTTACGGGTTTCATTCCCAAGTCTCTCAAGGAAAAGTCATATGCAACTTTGCAAATGAGTTTGGAAGATAATCCTGGCCTTTGTTTGGTGGATTCATGCAAAAAGCATAATAAGTTTGTCATTCCACTTGCGGCTTCTGTTTCAGCTTTGGCTGTAATCTTGCTGCTGATTTCTATAGTAATATGGATCTTCAAAACCAAAAAATTAAAAGTGGTTATAACTACTGTTTCTACGAATGAAGAATCGTTGCGACCAAGAAATCGCTCAGTTTCTTACTCCAGAATTCTCAGAATGACTGATAATTTGCAAGAGTTAATTGGAGAAGGAGGATTTGGGAAAGTTTATTATGGCACTCTAAGGGATAATATTCGAGTTGCTGTTAAAATACTTTCTCAATCATCAATGCAAGGTTTCAAAGAATTTCGATCAGAGGTAGAACTCTTGATGGTTATTCATCATAGACATTTGGTTTCACTGATTGGCTACTGTGAAGAAGGTAGTGTGAGGGCATTAATTTATGAATATATGGCTAATGGCAATCTCCAAAAGCATTTATCAGTGGAGAACCCTAATGTTTTGAACTGGGACGAGAGGATTCAAATTGCATTGGATGCCGCACAAGGATTGGACTACTTGCATAATGGTTGTAAACCACCAATTGTTACCTTGATCCTGAATTTCAAAGTTCTGGAAACCTAA 2205 0.3909 MSRRLLNSSLMTLLVVTENLDIQIRSNGKGTKVESDFRAVSRFHQACLSCWQHSGRWEETHHYGQEPXISGFISIDCGATRDYLYQETGIWYETDTNYVETGTSSVVSLNVNLDYPYFGGLLNTLRSFPDGKKNCYTLKPKQGKDHTYLIRAYFAYGNYDANNQTPIFDLYLGVNRWDTVDLGNNYYRMVEIIHTPTTDIIYVCLVKTILGVPFISALELRPLDNSIYQTPSPSQSLLINQGTFDIASTSSAAHSRYEDDIYDRLWRKMNVSNWYQINGSVDIDHSSTNDSYKLPSEVLKSAAQSSNLSYALSFDYDSIWKDLDRSSEYYVYFHFCEIQPLPPRQKRILNITIGGDGNFFSQQPIILEYLKPQTIVSQNASHGYVRFSISATSESYAPPILNAFEDIKDTYKINNSDWQGDPCVPKLAWDGLSCSSGFNGTNSRISSMNLSATKLTGKITTSFSKLTELESLDLSFNDLSGSIPEFLAELPKLRLLNLSGNKLTGFIPKSLKEKSYATLQMSLEDNPGLCLVDSCKKHNKFVIPLAASVSALAVILLLISIVIWIFKTKKLKVVITTVSTNEESLRPRNRSVSYSRILRMTDNLQELIGEGGFGKVYYGTLRDNIRVAVKILSQSSMQGFKEFRSEVELLMVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQKHLSVENPNVLNWDERIQIALDAAQGLDYLHNGCKPPIVTLILNFKVLET 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1244 734 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Mibi11g1244 734 SUPERFAMILY Protein kinase-like (PK-like) 588 723 IPR011009 -
Mibi11g1244 734 PRINTS Leucine-rich repeat signature 469 482 - -
Mibi11g1244 734 PRINTS Leucine-rich repeat signature 490 503 - -
Mibi11g1244 734 SUPERFAMILY L domain-like 430 512 - -
Mibi11g1244 734 Gene3D - 237 402 - -
Mibi11g1244 734 Pfam Protein tyrosine and serine/threonine kinase 604 716 IPR001245 GO:0004672|GO:0006468
Mibi11g1244 734 ProSiteProfiles Protein kinase domain profile. 602 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1244 734 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Mibi11g1244 734 FunFam Leucine-rich repeat receptor-like protein kinase 577 677 - -
Mibi11g1244 734 Gene3D Ribonuclease Inhibitor 403 526 IPR032675 -
Mibi11g1244 734 Pfam Malectin-like domain 75 405 IPR024788 -
Mibi11g1244 734 FunFam Leucine-rich repeat receptor-like kinase 399 530 - -
Mibi11g1244 734 Gene3D Transferase(Phosphotransferase) domain 1 588 732 - -
Mibi11g1244 734 PANTHER OS07G0107800 PROTEIN-RELATED 73 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1244 Mibi-ChrMibi11 30088208 30096076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1244 70 723 Receptor kinase-like Gene Family AT2G19230 42.006 3.46e-163 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi11g1244 Malectin_like 2.4e-83 CL0202