Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1242 ATGTTCATTGACCGTAAACACTTCAAGAATGTAGCTGCTGCTGTGTTGTCTGACAATGGAGCCCCTCCGTCTTCTTTCGATTACGATTTGTTGATTATTGGTGCTGCTGTTGGTGGCCATGATGCGGCGCTTCATGCTGTTGAGAAGGGCTTGAAAACGGCTATTGTTGAGGGAGATGTTGTCGGAGGAACGTGTGTAAACAGAGGTTGTGTCCCTCCTAAAGCACTTTTGGCAGTTAGTGGACGTATGCGTGAACTACAAAGTGATCATCTTTTGGCAGTTAGTAATTTGACCAATTCATTAAAGGCGCTTGGAGTAGACATACTCACAGACACAAGGAAAGGAACCGAGAAAGAGGTGCAAATTGAAGTGGAGAAAGTTAGAGAGTCTCTCTTCTCTTCAATGGAGTCCTATTACCCTTTCTCCTCCGTCTCAGATTTCAACAATGAAAATACCCACTTTCCTCCTGCCTTGCGCTTCTACCTTAGTGATGTAGAACCCATCACTCACTACCTCCACAAGAAAGCCCTTGTTGACAATACCTTCTCTAGTAGAGCCATTGCTGAAGTTGACCTCAACAAATGTGAGCCGTGGGAGCTTCCAGGTAAATTAAATTCTTCAGCTTTCCCCTTCCTTTCTCCTTTTCCTATGATTTTGAACCAACCCTGTTTTTTGTTTTTGTTTGGCATCATCAGAGAAAGCCAAGATGGGGAAGAACAAGTGGTTCTCTTTAGTCCGAGAGATAGGAAGTACCCAACAGGGCTAAGAACTAATAGGGCTACAGAAGCAGGAAATTGGAAGGCCACTGGGAAAGACAGAGAAATCTATAGCTCTAAGGATAATTGTGGTTTAGTTCGCATGAAGAAGGTGGGGGTGTTTCTTCCTTATAGGGTACTGTTCGCCCTGCGCCGCAGTGGCTTTCACTTGCAGACTGTTGTGCGTCATCAGACATTGGAATCTTTAATCGTTAGATTGTTTTCTGATTTTCTCAGCAATGAGTTTGCTTTGCAGATCGAAATCATATGCACTGATGATGAAAGTCAAGCCCAAGGAAGCAAGAACGAAGGCACGCCTCTCCCAGATTCCAGACCGGCAATTATGAAAAGCAGCAAAAAAAGTCTTTATTCCTCGGCCACCGGCAGCAACAACACTCGGCATGTACCGCTGAAAGGCAGAGATGATAACATGAATTCTAGGGCAAACATTATGCAAAAGGTCCTCACTTTGCAACGATCAAATAGCCTTATTGTCTACTTGGCTTGCCCTGCTTGGTATGCTCAATTTCACAGCCTTCCTTCCATCCCTTCTCTTGGTGGCTGTTTCTGGAGCACACTTTACTCGCCTGCAGATCACAGTGCTTCTCATTTCAGCCATCCTTATTATTATGAAGGCTTATGTCCCCTTTTTGGGATTCCTGTTGACTCATGTTTAGGCCACTCAGGAGAGAACAGAGAAAGCCTTTGA 1464 0.4467 MFIDRKHFKNVAAAVLSDNGAPPSSFDYDLLIIGAAVGGHDAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPPKALLAVSGRMRELQSDHLLAVSNLTNSLKALGVDILTDTRKGTEKEVQIEVEKVRESLFSSMESYYPFSSVSDFNNENTHFPPALRFYLSDVEPITHYLHKKALVDNTFSSRAIAEVDLNKCEPWELPGKLNSSAFPFLSPFPMILNQPCFLFLFGIIRESQDGEEQVVLFSPRDRKYPTGLRTNRATEAGNWKATGKDREIYSSKDNCGLVRMKKVGVFLPYRVLFALRRSGFHLQTVVRHQTLESLIVRLFSDFLSNEFALQIEIICTDDESQAQGSKNEGTPLPDSRPAIMKSSKKSLYSSATGSNNTRHVPLKGRDDNMNSRANIMQKVLTLQRSNSLIVYLACPAWYAQFHSLPSIPSLGGCFWSTLYSPADHSASHFSHPYYYEGLCPLFGIPVDSCLGHSGENRESL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1242 487 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 153 294 - -
Mibi11g1242 487 MobiDBLite consensus disorder prediction 375 394 - -
Mibi11g1242 487 Pfam Pyridine nucleotide-disulphide oxidoreductase 28 112 IPR023753 GO:0016491
Mibi11g1242 487 PRINTS Pyridine nucleotide disulphide reductase class-I signature 61 76 - -
Mibi11g1242 487 PRINTS Pyridine nucleotide disulphide reductase class-I signature 29 51 - -
Mibi11g1242 487 SUPERFAMILY FAD/NAD(P)-binding domain 24 116 IPR036188 -
Mibi11g1242 487 Gene3D NAC domain 163 299 IPR036093 GO:0003677|GO:0006355
Mibi11g1242 487 ProSiteProfiles NAC domain profile. 154 328 IPR003441 GO:0003677|GO:0006355
Mibi11g1242 487 Pfam No apical meristem (NAM) protein 155 294 IPR003441 GO:0003677|GO:0006355
Mibi11g1242 487 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 62 72 IPR012999 GO:0016668
Mibi11g1242 487 Gene3D - 19 134 IPR036188 -
Mibi11g1242 487 SUPERFAMILY NAC domain 147 294 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1242 Mibi-ChrMibi11 29906816 29916245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1242 146 326 NAC Transcription Factor Family AT5G53950 46.073 1.68e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi11g1242 NAM 2.2e-12 No_clan