Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1240 ATGGAGTCCTATTACCCTTTCTCCTCCTCAGATTTCAACAATGAAAATACTCACTATTTGCCTCCCGGCTTTCGCTTCTACCCAACAGATGAAGAACTCATCACTCACTACCTCTGCAAGAAAGTCCTTGTTGACAATACCTTCTCTGGTGGAGCCATTGCTGATGAAGTTGACCTCAACAAATGTGAGCCATGGGAGCTTCCGGAGAAAGCAAAGATGGGGGAGAACGAGTGGTACTTTTTTAGTCTGAGAGATAGGAAGTACCCAACAGGGCTAAGAACTAATAGAGCTACAGAAGCAGAATATTGGAAGGCCACAGGGAAGGACAGAGAAATCTATAGCTCTACGAATAATTTTGGGTCTGCAGGCATGTATAAGACTCGTGTGTTCATTAATTCTTGTCTAGCCAAAGCAACCGATGTGGCGGAGGATTTTCTTATTTACGGGATTGGTTTGTGTGCTTACGTGACTTTGGCAACTCTATTCGCTGTTATGATCAGAGGAACATACTTCTTCCACTTCGATGATGATTGCACTGATGATGAAAGTCAAGCCCAAGGAAGCAAGAAAGAAGGGATGCTTCTCAGAAATTCATCGCCTGCACTCATGGAAGGCAACAAAACAAGTTCATCAGTTAATGGCAGCAACAACACTTGGCATGTACCACTGAAAGGCAGAGATGATAACATGAATTCCAGGGCAAACATTATGCAAAAGGTCTCATCGTGGATAACTGTTTTGACATTTCCAGGGTGCTTATTACTCTCAAATTACAAACATTATTCCTCACTTTGCAACGATCAAATAGCTTCTTTGTCTATTTGCCTTGCCTTGCTTGGTATGCTCAATTTGGCAGCCTTCCTTCCATCCCTTATCTTAATGGCTGTTTCTGGAGCACACTTCACTCGCCTGCAGATAACAATGCTTCTCATTTCAGCCATGCTTATCATTATGAAGGCTTATGTCCCCTTTTTGGGATTTCTGTTCACTCATGTTTAG 999 0.4274 MESYYPFSSSDFNNENTHYLPPGFRFYPTDEELITHYLCKKVLVDNTFSGGAIADEVDLNKCEPWELPEKAKMGENEWYFFSLRDRKYPTGLRTNRATEAEYWKATGKDREIYSSTNNFGSAGMYKTRVFINSCLAKATDVAEDFLIYGIGLCAYVTLATLFAVMIRGTYFFHFDDDCTDDESQAQGSKKEGMLLRNSSPALMEGNKTSSSVNGSNNTWHVPLKGRDDNMNSRANIMQKVSSWITVLTFPGCLLLSNYKHYSSLCNDQIASLSICLALLGMLNLAAFLPSLILMAVSGAHFTRLQITMLLISAMLIIMKAYVPFLGFLFTHV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1240 332 SUPERFAMILY NAC domain 17 131 IPR036093 GO:0003677|GO:0006355
Mibi11g1240 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 134 - -
Mibi11g1240 332 Pfam No apical meristem (NAM) protein 21 132 IPR003441 GO:0003677|GO:0006355
Mibi11g1240 332 Gene3D NAC domain 29 145 IPR036093 GO:0003677|GO:0006355
Mibi11g1240 332 ProSiteProfiles NAC domain profile. 20 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1240 Mibi-ChrMibi11 29874242 29876102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1240 16 138 NAC Transcription Factor Family AT5G53950 72.358 2.82e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi11g1240 NAM 3.6e-26 No_clan