Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1224 ATGACCAAAATTTTCCTTATACTCCTTCATTTGCTACTACTCATACAAATTTACTCTTCCAAATCTGATGATAATATTGCCGTTTACTGGGGTCAGAACGTTGAAGAAGGTAATCTTACAGAGACATGTGCAACAGGAAGATACTCTTTTGTTCTGATTGCCTTCCTTTCAAGCTTTGGCAATGGCCAAACCCCTCAACTCAACCTCGCAGGTCACTGTAACACTTCTTCTTCATCTGGGTGCACCTCAATCAGCTCACAGATCAAATATTGTCAACAACAAGGAATCAAGGTTATGCTCTCTATTGGAGGAGGAGGAGGATCTGGAACTTACTCTTTATCTTCCTCTGAGGATGCACAAAATGTTTCAAATTACTTGTGGAACAATTTCTTAGGAGGAAATTCATCTTCACGCCCACTTGGAGATGCCATATTAGATGGCATCGATTTTGATATTCAGGCATCTACTAAAAACTTGGATGTCCTTGCTCGTTACCTCAAGTCACATACCCAGAAATTGTACTTATCCGCAGCACCTCAATGCCCATTTCCTGATGCTTATCTTGGTACTGCCCTTGATACAGGCCTTTTTGATCATGTATGGGTACAATTCTACAACAACCCTCCCTGTGACTATTCAGATTCCAATCCTAATGCGTTTTTCAATTCATGGGACCGGTGGGCGACATCATTAAATAGGTCGAAAATATTCCTGGGTTTGCCTGCATCTAAGGAAGTAGCAACCAGTGGCTATGTTTCTGCAGATTTGTTAGTCTCTAAGGTACTTCCTACTGTCAGGAAATCATCTAACTATGGAGGTGTTATGTTGTGGTCAAGATACGAAGATAGATTGAGTGAATATAGTACGGATATTCAAATTGGTCCTCTTTGCACTCCTCAAAGTGCTCCTAAATGCAGGAACCATGACATTGGTTTTAAAGAGGGTTTTGGTTACATGTCTACTGATAGTATTAAGGTTTTCGAAAGTGAGAATTTTGATGGGCAATGTTGTGAAACTATATGCTGGAACAATTGTTCTTGTGAGGCTTATGCACCATTGAATCAGGCTAACAAAACTGGATGCCAGATATGGCTTCAAGGAACCAGGTTCAGGGAAGATGCAGGGTCAAAAGGACAGTCAATTTATGTTGTTAGACACAAAGTAAACAGGTGGTGGATGTGGCTTATTGTTGCGGTTGGATCAACCCTAGCATTATCTCTGATTTGCTACTTATGCTATGCCTCATTGAGAAAATACAAAGCAAAAGCGGATAGTAGAACGAAGCAAAAGAAGATATTACATGAAATTGGAGGCAATGCAATGATTTCAATGGTGTATGGCAAAGTTAAAAGGAACAAGAAACATGGGAAGGAAAGAAATGAGGTTGAAATATTCAGTTTTCAGAGCATTGTGGCTGCAACAAACAATTTCTCAGATTCTAACAAGCTTGGAGAGGGTGGTTTTGGTCCTGTATATAAGGGGACACTTACCGATGGGCAGGAAGTAGCAATCAAGCGACTTTCTAAAAGTTCTGGGCAAGGGCTTACAGAATTCAAGAATGAGGCTAAGCTTATGGCTAAACTGCAGCATACTAATCTTGTGAGGCTTTTTGGGTTCTGCATTGAAAGAGATGAGAGAATATTAGTTTATGAGTACATGCCTAACAAAAGCTTGGATTTCTATATATTTGATGCAAGCAGAAGGAATGTACTGAATTGGGAAAAACGATTTAGTATCATTGAAGGGATTGCTCAAGGACTTCTTTATCTGCACAAATATTCAAGACTAAAAGTAATACATCGTGACTTGAAGGCAAGCAATATATTACTTGATGAGGAAATGAATTCTAAATTATCTGACTTTGGCATGGCTCGAATATCTGGATTAAGAGAATCTGAAGAAAATACGAATAGAGTAGTCGGTACACGTGGCTACATGGCTCCAGAATATGCAATCAATGGTGTTGTTTCAATCAAAATAGACATATTTAGTTTCGGTGTGTTGCTGATAGAGATTCTTAGTGGCAAAAAGAATAATAGTCGATTTGATTTAGATCGTCCTTTGAATCTGATTGGATATGCATGGCAGCTCTGGAATGAAGGTAAAGCTTTAGAGCTAATAGATTCGACATTAAATGAACCAATTTTGCAAAACAAAGTGAGGAGAGGTATTCATATTGGGCTGTTGTGTGTGCAAGATCAAGCAAAAGACAGACCTTCCATGCTAGATATAATTTCTTTTCTATCAAATGAATCTATTCAACTAGTACAACCAAAGCAGCCAGCATACTTTATCGGTGACGTTGAGGATGAGTCCGAGGTACATAGCATCAGACAAGGACATTATTCCACAAATTACGTCACAATTTCTAATCTAGATGCAAGATAA 2388 0.3894 MTKIFLILLHLLLLIQIYSSKSDDNIAVYWGQNVEEGNLTETCATGRYSFVLIAFLSSFGNGQTPQLNLAGHCNTSSSSGCTSISSQIKYCQQQGIKVMLSIGGGGGSGTYSLSSSEDAQNVSNYLWNNFLGGNSSSRPLGDAILDGIDFDIQASTKNLDVLARYLKSHTQKLYLSAAPQCPFPDAYLGTALDTGLFDHVWVQFYNNPPCDYSDSNPNAFFNSWDRWATSLNRSKIFLGLPASKEVATSGYVSADLLVSKVLPTVRKSSNYGGVMLWSRYEDRLSEYSTDIQIGPLCTPQSAPKCRNHDIGFKEGFGYMSTDSIKVFESENFDGQCCETICWNNCSCEAYAPLNQANKTGCQIWLQGTRFREDAGSKGQSIYVVRHKVNRWWMWLIVAVGSTLALSLICYLCYASLRKYKAKADSRTKQKKILHEIGGNAMISMVYGKVKRNKKHGKERNEVEIFSFQSIVAATNNFSDSNKLGEGGFGPVYKGTLTDGQEVAIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLVRLFGFCIERDERILVYEYMPNKSLDFYIFDASRRNVLNWEKRFSIIEGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNSKLSDFGMARISGLRESEENTNRVVGTRGYMAPEYAINGVVSIKIDIFSFGVLLIEILSGKKNNSRFDLDRPLNLIGYAWQLWNEGKALELIDSTLNEPILQNKVRRGIHIGLLCVQDQAKDRPSMLDIISFLSNESIQLVQPKQPAYFIGDVEDESEVHSIRQGHYSTNYVTISNLDAR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1224 795 Pfam Glycosyl hydrolases family 18 26 282 IPR001223 GO:0005975
Mibi11g1224 795 CDD GH18_hevamine_XipI_class_III 25 291 IPR045321 -
Mibi11g1224 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 443 552 - -
Mibi11g1224 795 Pfam Domain of unknown function (DUF3403) 750 795 IPR021820 GO:0004674
Mibi11g1224 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 553 756 - -
Mibi11g1224 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Mibi11g1224 795 SUPERFAMILY Protein kinase-like (PK-like) 460 776 IPR011009 -
Mibi11g1224 795 Pfam Protein kinase domain 478 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1224 795 SUPERFAMILY (Trans)glycosidases 22 290 IPR017853 -
Mibi11g1224 795 FunFam Acidic endochitinase SE2 24 294 - -
Mibi11g1224 795 ProSiteProfiles Protein kinase domain profile. 477 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi11g1224 795 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 292 771 - -
Mibi11g1224 795 Pfam PAN-like domain 330 366 IPR003609 -
Mibi11g1224 795 Gene3D Transferase(Phosphotransferase) domain 1 553 761 - -
Mibi11g1224 795 Gene3D Glycosidases 24 294 - -
Mibi11g1224 795 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 295 IPR001223 GO:0005975
Mibi11g1224 795 Gene3D Phosphorylase Kinase; domain 1 424 552 - -
Mibi11g1224 795 SMART serkin_6 477 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1224 Mibi-ChrMibi11 29733953 29737869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1224 465 771 Receptor kinase-like Gene Family AT3G45860 55.987 1.80e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi11g1224 Pkinase 1.6e-47 CL0016