Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1212 ATGCCTCCCCTTCAGGCTTACCATCTCGACCGTAAAATCGGGCGAGCAATCGTTGGTGCAAACTTCCAAATCCCGACCGTTAATTCAAGGGTTTATTACTTCCCTCAGGGCCATATTGAGCATGCTTCATCGCCCCTTCAATACCTTAACCCTCTGATCATCTACAGGCCAATCATTCCATGTCGTGTCTCTGCTTTGGAGTTTCTTGCTGACCCTGTCACCGATGAGGTTTATGTCAAGATTTCTCTTGTTCCTGTACTCCCTGATGATGATGATTACAACAACGGTTCTCATCATGATCCTTTTGCCTTGGTGGCGCCGGACGATGAAACGGTGTCGCCGTTTTCGATAAAGGTTTTGACGCCTTCTGATGCTAACAATGGCGGTGGATTCTCTGTTCCTAGGAAATGTGCTGATACCATCTTCCCGCCTCTCAACTTCGCCGTCGAGCGACCCTTTCAGACATTGCAGGTGACGGATGTTCTGGGGAAAATCTGCAAGTTTCGCCACATTTATCGGGGCACACCTAAGCGTCACTTGCTCACTACTGGCTGGAAATTGGCTGTGCAAAACAAGCCATTTGAGGTTGTGTATTATCCTAGGTTGGGCTGGTCGGACTTTGTGGTAAAGGCGGAAGCTGTGGAGAAAGCTTGGAATGTTGCATGGACTTCTGGAATGAGAGTTAAAATGCCAATGGAGACAGACGATTCGTCCAGGACTGTATGGTATGAGGGGACTGTAACTTCTACAGCTGCTCCTGATAATGAGCTTTGGCAGGGTTCTCCATGGCGTAAGTTTCAGGTTATGTGGGATGAACCTAAAGTCATGCAGATTGCTAAGCGAGTGAGCCCCTGGGAGGTTGAACCTGTTACGTCTCCAATTCCCCATGCTCCGGTATTCCCTCCTCCTGCAAAAAGGTTTAGAGATGCTCAGTATTTTGGGGTGGCTACTGATGGACAAGAAGACCCCTTCTTTTCTATTTCAGATTTGGGCAATTCAACAATGGGGCACTTCAACCAATCACTGTTGAATTACAATAGTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTAACAAGTCTCTCCAACTTTGAAATTGGTAATCCTCATTTGTATATTGGTAATATATTCGGGAACATGGTACCCAAGATGAGAACTTTGACGTCCACAGAGCCAAATGTTGACAGTTGTCAGTCTAATAGCTTGTCACTAGAAAGCCGGAGTAGTTTGCATGGTCCAGGCATAGAAGTTGCTGGGACACGAGGCTGCAATTTAACAAGAGAATGCAACTTAACAAGACCAAGTGGAAATTCAATTCGATTGTTCGGTAAGGTCATCCAAGTGGAACAGCCCGTTGAAAGTGGGTGCACGACAGATGAGGGTAATAATGGCTGCAAGGAGACTGAAGGCGTTGACCAATGA 1434 0.4693 MPPLQAYHLDRKIGRAIVGANFQIPTVNSRVYYFPQGHIEHASSPLQYLNPLIIYRPIIPCRVSALEFLADPVTDEVYVKISLVPVLPDDDDYNNGSHHDPFALVAPDDETVSPFSIKVLTPSDANNGGGFSVPRKCADTIFPPLNFAVERPFQTLQVTDVLGKICKFRHIYRGTPKRHLLTTGWKLAVQNKPFEVVYYPRLGWSDFVVKAEAVEKAWNVAWTSGMRVKMPMETDDSSRTVWYEGTVTSTAAPDNELWQGSPWRKFQVMWDEPKVMQIAKRVSPWEVEPVTSPIPHAPVFPPPAKRFRDAQYFGVATDGQEDPFFSISDLGNSTMGHFNQSLLNYNSVPAGMQGARQDLSSVTSLSNFEIGNPHLYIGNIFGNMVPKMRTLTSTEPNVDSCQSNSLSLESRSSLHGPGIEVAGTRGCNLTRECNLTRPSGNSIRLFGKVIQVEQPVESGCTTDEGNNGCKETEGVDQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1212 477 CDD B3_DNA 114 186 IPR003340 GO:0003677
Mibi11g1212 477 Pfam Auxin response factor 187 267 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi11g1212 477 Pfam B3 DNA binding domain 117 192 IPR003340 GO:0003677
Mibi11g1212 477 Gene3D - 222 294 - -
Mibi11g1212 477 SUPERFAMILY DNA-binding pseudobarrel domain 116 191 IPR015300 -
Mibi11g1212 477 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 192 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi11g1212 477 Gene3D - 115 217 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1212 Mibi-ChrMibi11 29588120 29591419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1212 168 473 B3 DNA Binding Superfamily AT1G77850 37.380 1.04e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi11g1212 Auxin_resp 1.5e-25 No_clan