Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1211 ATGCCTCCCCTTCAGGCTTACCATCTCGACCGTAAAATCGGTCGAGCAATCGTTGGTGCAAACTTTCAAATCCCGACCGTTAATTCAAGGGTTTATTACTTCCCTCAGGGCCATATTGAGCATGCTTCATCGCCCCTTCAACACCTTAACCCTCTGATCATCTACAGGCCAATCATTCCCTGCCACGTCTCCGCTTTGGAGTATCTCGCTGACCCCGTCACCGACGAGGTTTACGTCAAGATTTCTCTTGTTCCTGTACCTGATGATGATAACAACAACGGCTCTGATAATCCTTTTGCCAATTATTCCTTGGTGGCGGCGGACGATGATGAAACGGTGTCGCCGTTTTCGGTAAAGGTTTTGACGCTTTCTGACGCCAACAATGGCGGTGGATTCTCTGTTCCTAGGAAATGTGCTGACACCATCTTCCCGCCTCTCAACTTTGCTCTCGAGCGACCCTATCAGACATTGCAGGTGACGGATGTTCTGGGAAAAGTCTGCGAGTTTCGCCACACATATCGAGGAACACCTAAGCGTCACTTGCTCACTACTGGCTGGAGTAAGTTTGTGAATGACAAGTTGTTGATTGCTGGTGATTCGGTTGTTTTCATGAAGGATTCCGCTGGGACTATGTTTATTGGGATTCGTAGAGCTTTCCGATCTCCGAAATTGATTGTCATTGATTCCTCCATGTGGAATAAGCCTGAGGGGGAGCAGCAGCAAGAACGAGTGAAAGAAGGGGTGTTTTTAAGGAATGGGAAGGGGAGACTGAAGGCTAAGGAGGTTTCTGATGCTATAGAATTGGCTGTGCAAAACAAGCCATTTGAGGTTGTGTATTATCCTAGGTTGGGCTGGTCGGACTTTGTGGTAAAGGCGGAAGCTTTGGAGAAAGCTTGGAATGTCGCATGGACTTCTGGAATGAGAGTTAAAATGCCAATGGAGACAGACGATTCGTCCAGGACTGTATGGTATGAGGGGACTGTAACTTCGACAGCTGCTCCTGATAATGAGCTTTGGCAGGGTTCTCCATGGCGTAAGCTTCAGGTTATGTGGGATGAACCTAAAGTCATGCAGATTGCAAAGCGAGTGAGCCCCTGGGAGGTTGAACCTGTTACTTCTGCAATTCCCCATGCTCCGGTATTCCCTCCTGCAAAAAGGTTTAGAGATGCTCATTATTTTGGGGTGGCTACTGATAGACAGGGAGACCCCTTCTTTTCTATTTCAGATTTGGGCAATTCGACATTGAGGCACTTCAACCAATCACTGTTGAATTACAATACTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTAACGAGTCTCTCCAACTTTGAAATTGGTAATCCTCATCTGTATATTGGTAATACATTCGGGAACATGGTACCCAAGATGAGAACTTTGACGTCAACAGAGCCATATGCTGACAGTTATCAGTCTAATAGCTTGTCACAAGAAAGCCAGAGTAGTTTGCATGGTCCAGGCACAGAAGTTACTGGGACAGGAGGCTGCAACTTAACAAGACCAGGTGGAAATTCAATTCGGTTGTTTGGTAAGGTCATCCAAGTGGAACAGCCCGTTGAAAGTGGGTCCACGACAGATGAGGGTAATAATGGTTGCAAGGAGACTGAAGGCGTGGACCAATGA 1656 0.4722 MPPLQAYHLDRKIGRAIVGANFQIPTVNSRVYYFPQGHIEHASSPLQHLNPLIIYRPIIPCHVSALEYLADPVTDEVYVKISLVPVPDDDNNNGSDNPFANYSLVAADDDETVSPFSVKVLTLSDANNGGGFSVPRKCADTIFPPLNFALERPYQTLQVTDVLGKVCEFRHTYRGTPKRHLLTTGWSKFVNDKLLIAGDSVVFMKDSAGTMFIGIRRAFRSPKLIVIDSSMWNKPEGEQQQERVKEGVFLRNGKGRLKAKEVSDAIELAVQNKPFEVVYYPRLGWSDFVVKAEALEKAWNVAWTSGMRVKMPMETDDSSRTVWYEGTVTSTAAPDNELWQGSPWRKLQVMWDEPKVMQIAKRVSPWEVEPVTSAIPHAPVFPPAKRFRDAHYFGVATDRQGDPFFSISDLGNSTLRHFNQSLLNYNTVPAGMQGARQDLSSVTSLSNFEIGNPHLYIGNTFGNMVPKMRTLTSTEPYADSYQSNSLSQESQSSLHGPGTEVTGTGGCNLTRPGGNSIRLFGKVIQVEQPVESGSTTDEGNNGCKETEGVDQ 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1211 551 MobiDBLite consensus disorder prediction 527 551 - -
Mibi11g1211 551 SUPERFAMILY DNA-binding pseudobarrel domain 115 220 IPR015300 -
Mibi11g1211 551 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
Mibi11g1211 551 Pfam Auxin response factor 265 348 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi11g1211 551 MobiDBLite consensus disorder prediction 478 510 - -
Mibi11g1211 551 Gene3D - 303 375 - -
Mibi11g1211 551 FunFam Auxin response factor 115 219 - -
Mibi11g1211 551 CDD B3_DNA 115 217 IPR003340 GO:0003677
Mibi11g1211 551 Gene3D - 116 219 IPR015300 -
Mibi11g1211 551 MobiDBLite consensus disorder prediction 528 542 - -
Mibi11g1211 551 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 535 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi11g1211 551 SMART B3_2 117 219 IPR003340 GO:0003677
Mibi11g1211 551 Pfam B3 DNA binding domain 118 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1211 Mibi-ChrMibi11 29577273 29579973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1211 9 547 B3 DNA Binding Superfamily AT1G77850 43.297 1.91e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi11g1211 B3 3.3e-18 CL0405