LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi11g1200	ATGAGGAAAATGGGGAAGGTGGTGGAGGACTTGAAGCCAGCTTTGATGATGATAATGGTTCAAGTGGCATATGCAGGAGTGAGTATATTATACAAAGTGGTTTCCAATAATGAAGGAACCAGCTTGACTATTCTCATGGCCTATCGTTTCCTTTTCGCTTCTGCTTTCATGGTTCCCCTTGCTTATTTCGTGGAAAGGAAGAGCAAACCCAAAATCACAGGGAAAGTGCTGCTACAAGCATTCATGTGTGGATTATTTGGGGCCTCACTGCAACAAAACTTATTTGTGCAAGCAGTGTCATTAGCGGGGGCAACATACGCTACGGCCATGTACAACCTTATTCCTGGTGCAACCTTCATTTTAGCCGTTTGTTTTGGACTGGAAAAGTTGAATATAAGAAGAACATCGGGGAAGGCCAAGGTGGTAGGGACATTAATGGGAATTGGAGGGGCCATGGTCTTGACATTCTATAAGAGTACAGAGATACATTTATGGTCAACTCACTTGAACATTATGAAACATTTGGCCCCACATAATGTGTCCTCCAATCAAACTTGGGGCATTGCTTTGGCCATTGGCACTTGCCTCTCATATTCACTTTGGCTGATTATTCAGGCAAAGATGAGTGAGAAGTTTCCATGGGCATATACAAGTGCAGCATTGATGTCAGTGATGGCAGCAATACAATCAGTCTTATTTGCACTCTTCATGGAAAGAGACTGGAGCCGTTGGAAGCTTGGTTGGAATATATTTCTTCTTACTGCTGTCTATACGGGCATTGTGGCATCAGGAGTAGCTTGGATTTTAATCACATGTTGTGTAAGACAAAAAGGACCACTCTTTACTTCCATTTTCAACCCTCTCTTTCTTATACTTGTCGCCATTGCTGGCACTTTTCTCTTGGATGAAAGGTTGCATTTGGGAAGCCTGATAGGATCCACATTGATAATAATGGGCCTATACGCAGTCCTGTGGGGAAAAGGCCAAGAGTTCAAGAGAAAAGTAGATGAGAATGTTGAAGCAAAAGAATCATCGGTTGAAATAAAGATAATTACTACCACTTCAAATAGTGATCTTCATCATCATCATCAAGTTACTAACAAAACTATCATCATCAATGGTGACGAAAAAAGTGGTGATAAGACGTCCAAATCTTCACCTCAAATCTGA	1170	0.4162	MRKMGKVVEDLKPALMMIMVQVAYAGVSILYKVVSNNEGTSLTILMAYRFLFASAFMVPLAYFVERKSKPKITGKVLLQAFMCGLFGASLQQNLFVQAVSLAGATYATAMYNLIPGATFILAVCFGLEKLNIRRTSGKAKVVGTLMGIGGAMVLTFYKSTEIHLWSTHLNIMKHLAPHNVSSNQTWGIALAIGTCLSYSLWLIIQAKMSEKFPWAYTSAALMSVMAAIQSVLFALFMERDWSRWKLGWNIFLLTAVYTGIVASGVAWILITCCVRQKGPLFTSIFNPLFLILVAIAGTFLLDERLHLGSLIGSTLIIMGLYAVLWGKGQEFKRKVDENVEAKESSVEIKIITTTSNSDLHHHHQVTNKTIIINGDEKSGDKTSKSSPQI	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi11g1200	389	Pfam	EamA-like transporter family	12	155	IPR000620	GO:0016020
	Mibi11g1200	389	Pfam	EamA-like transporter family	186	324	IPR000620	GO:0016020
	Mibi11g1200	389	PANTHER	WAT1-RELATED PROTEIN	12	331	IPR030184	GO:0016020\|GO:0022857
	Mibi11g1200	389	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	224	329	-	-
	Mibi11g1200	389	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	48	157	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi11g1200	Mibi-ChrMibi11	29450874	29456108	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi11g1200	11	359	Nodulin-like Gene Family	AT1G25270	37.746	1.34e-85	262