Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1191 ATGGAAAAGGATGGTGGTTTAGGGCTTGAGATTACGGAGTTGAGGTTAGGTCTTCCTGGGAGGAGGGAGGAGAAGAAGAATGAGAGGAAGAGGCTATTCTCTGAGATTGATGGTGGTGATTGTGGTCATGAGGAAGATGGTGGTGGTGGTGAGGATCAGAATAGCTCGTCGGAGGGTGGTGGTGGTGACCGGAAGGTGGTGGCTGCGGTGGGGTGGCCACCGGTGTGCTCTTACCGGAGGAAGAATAGTATGAGTAATAATAATGAAGGGTCAAAAATGTATGTGAAAGTGAGTATGGATGGAGCTCCTTTCTTACGCAAAATTGATTTGGAAAAGCTTAAGGGTTACTCTCAACTTGCTTTTGCCTTGGAAAAGCTCTTCGGTTGCTATGGAATTAATGAGGCGTTGAAGAATGGAGACAAAAGTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATGGAAACATGCAAGAGGCTAAGGATAATGAAGAAATCAGACGCAAAGGGATTTGGTGTGACACCAAAAGGGTCACTAAAGGGATATATAGAAGGCGTCACCAACTGA 606 0.4587 MEKDGGLGLEITELRLGLPGRREEKKNERKRLFSEIDGGDCGHEEDGGGGEDQNSSSEGGGGDRKVVAAVGWPPVCSYRRKNSMSNNNEGSKMYVKVSMDGAPFLRKIDLEKLKGYSQLAFALEKLFGCYGINEALKNGDKSEHVPIYEDKDGDWMLVGDVPWEMFMETCKRLRIMKKSDAKGFGVTPKGSLKGYIEGVTN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1191 201 Gene3D - 86 189 - -
Mibi11g1191 201 MobiDBLite consensus disorder prediction 18 64 - -
Mibi11g1191 201 FunFam Auxin-responsive protein 87 188 - -
Mibi11g1191 201 Pfam AUX/IAA family 64 184 IPR033389 -
Mibi11g1191 201 SUPERFAMILY CAD & PB1 domains 82 177 - -
Mibi11g1191 201 ProSiteProfiles PB1 domain profile. 92 180 IPR000270 GO:0005515
Mibi11g1191 201 MobiDBLite consensus disorder prediction 18 50 - -
Mibi11g1191 201 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 181 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1191 Mibi-ChrMibi11 29220227 29224467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1191 81 193 B3 DNA Binding Superfamily AT4G23980 37.168 1.47e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi11g1191 AUX_IAA 4.8e-44 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0736 04 15070090 15072434 Mibi11g1191 11 29220227 29224467 CCT
Mibi11g1191 11 29220227 29224467 Mibi11g1191 11 29220227 29224467 ECH